Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ApoeP08226 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ApoeP08226 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.8□□□□□ -0.2
ApoeP08226 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ApoeP08226 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ApoeP08226 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ApoeP08226 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ApoeP08226 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ApoeP08226 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.8□□□□□ -0.2
ApoeP08226 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
ApoeP08226 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ApoeP08226 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.8□□□□□ -0.2
ApoeP08226 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
ApoeP08226 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.79□□□□□ -0.2
ApoeP08226 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ApoeP08226 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.79□□□□□ -0.2
ApoeP08226 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.79□□□□□ -0.2
ApoeP08226 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.79□□□□□ -0.2
ApoeP08226 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.79□□□□□ -0.2
ApoeP08226 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ApoeP08226 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
ApoeP08226 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.79□□□□□ -0.2
ApoeP08226 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ApoeP08226 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ApoeP08226 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
ApoeP08226 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ApoeP08226 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ApoeP08226 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
ApoeP08226 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
ApoeP08226 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
ApoeP08226 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
ApoeP08226 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ApoeP08226 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
ApoeP08226 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
ApoeP08226 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ApoeP08226 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
ApoeP08226 Gm12895-201ENSMUST00000122214 226 ntBASIC13.78□□□□□ -0.2
ApoeP08226 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.78□□□□□ -0.2
ApoeP08226 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.78□□□□□ -0.2
ApoeP08226 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.78□□□□□ -0.2
ApoeP08226 Gm27357-201ENSMUST00000183754 135 ntBASIC13.78□□□□□ -0.2
ApoeP08226 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.78□□□□□ -0.2
ApoeP08226 Gm9682-201ENSMUST00000197505 556 ntBASIC13.78□□□□□ -0.2
ApoeP08226 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.78□□□□□ -0.2
ApoeP08226 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ApoeP08226 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ApoeP08226 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ApoeP08226 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ApoeP08226 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ApoeP08226 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ApoeP08226 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ApoeP08226 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
ApoeP08226 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
ApoeP08226 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ApoeP08226 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ApoeP08226 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ApoeP08226 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.78□□□□□ -0.2
ApoeP08226 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ApoeP08226 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ApoeP08226 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ApoeP08226 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
ApoeP08226 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
ApoeP08226 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ApoeP08226 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ApoeP08226 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.78□□□□□ -0.2
ApoeP08226 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ApoeP08226 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ApoeP08226 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.78□□□□□ -0.2
ApoeP08226 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ApoeP08226 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
ApoeP08226 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
ApoeP08226 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ApoeP08226 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
ApoeP08226 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms