Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 AA619741-201ENSMUST00000195095 646 ntBASIC14.33□□□□□ -0.12
Hoxa4P06798 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.33□□□□□ -0.12
Hoxa4P06798 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa4P06798 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa4P06798 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hoxa4P06798 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa4P06798 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Hoxa4P06798 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.33□□□□□ -0.12
Hoxa4P06798 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hoxa4P06798 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa4P06798 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hoxa4P06798 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa4P06798 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa4P06798 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa4P06798 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.33□□□□□ -0.12
Hoxa4P06798 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa4P06798 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa4P06798 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.33□□□□□ -0.12
Hoxa4P06798 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa4P06798 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
Hoxa4P06798 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa4P06798 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa4P06798 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa4P06798 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa4P06798 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa4P06798 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa4P06798 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa4P06798 Gm6222-201ENSMUST00000120787 396 ntBASIC14.32□□□□□ -0.12
Hoxa4P06798 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.32□□□□□ -0.12
Hoxa4P06798 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa4P06798 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa4P06798 Gm27622-201ENSMUST00000183779 60 ntBASIC14.32□□□□□ -0.12
Hoxa4P06798 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.32□□□□□ -0.12
Hoxa4P06798 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa4P06798 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hoxa4P06798 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa4P06798 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa4P06798 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.32□□□□□ -0.12
Hoxa4P06798 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hoxa4P06798 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.32□□□□□ -0.12
Hoxa4P06798 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa4P06798 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa4P06798 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa4P06798 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa4P06798 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hoxa4P06798 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Hoxa4P06798 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa4P06798 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa4P06798 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa4P06798 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa4P06798 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa4P06798 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa4P06798 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Hoxa4P06798 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Hoxa4P06798 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa4P06798 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.31□□□□□ -0.12
Hoxa4P06798 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.31□□□□□ -0.12
Hoxa4P06798 Gm27631-201ENSMUST00000184163 466 ntBASIC14.31□□□□□ -0.12
Hoxa4P06798 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.31□□□□□ -0.12
Hoxa4P06798 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.31□□□□□ -0.12
Hoxa4P06798 Gm45453-201ENSMUST00000211758 853 ntBASIC14.31□□□□□ -0.12
Hoxa4P06798 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.31□□□□□ -0.12
Hoxa4P06798 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa4P06798 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa4P06798 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.31□□□□□ -0.12
Hoxa4P06798 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa4P06798 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa4P06798 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa4P06798 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa4P06798 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa4P06798 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa4P06798 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa4P06798 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa4P06798 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa4P06798 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa4P06798 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa4P06798 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Hoxa4P06798 BC001981-202ENSMUST00000191393 1545 ntBASIC14.31□□□□□ -0.12
Hoxa4P06798 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa4P06798 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa4P06798 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa4P06798 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa4P06798 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hoxa4P06798 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa4P06798 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa4P06798 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa4P06798 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa4P06798 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.3□□□□□ -0.12
Hoxa4P06798 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Hoxa4P06798 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.3□□□□□ -0.12
Hoxa4P06798 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa4P06798 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa4P06798 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.3□□□□□ -0.12
Hoxa4P06798 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.3□□□□□ -0.12
Hoxa4P06798 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa4P06798 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Hoxa4P06798 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa4P06798 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.3□□□□□ -0.12
Hoxa4P06798 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa4P06798 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms