Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Gm27628-201ENSMUST00000184911 107 ntBASIC10.34□□□□□ -0.75
Sh2d1aO88890 Gm27741-201ENSMUST00000185060 237 ntBASIC10.34□□□□□ -0.75
Sh2d1aO88890 Gm2651-201ENSMUST00000203560 838 ntBASIC10.34□□□□□ -0.75
Sh2d1aO88890 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC10.34□□□□□ -0.75
Sh2d1aO88890 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Mzt1-203ENSMUST00000227948 952 ntBASIC10.34□□□□□ -0.75
Sh2d1aO88890 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Gm37019-201ENSMUST00000192133 2134 ntBASIC10.34□□□□□ -0.75
Sh2d1aO88890 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Gm37297-201ENSMUST00000192974 2384 ntBASIC10.33□□□□□ -0.76
Sh2d1aO88890 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Mir5126-201ENSMUST00000175513 77 ntBASIC10.33□□□□□ -0.76
Sh2d1aO88890 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Sh2d1aO88890 AC164567.1-201ENSMUST00000219185 960 ntBASIC10.33□□□□□ -0.76
Sh2d1aO88890 AC131709.1-201ENSMUST00000224731 1180 ntBASIC10.33□□□□□ -0.76
Sh2d1aO88890 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Mxra8os-201ENSMUST00000097740 687 ntBASIC10.33□□□□□ -0.76
Sh2d1aO88890 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Gm21009-201ENSMUST00000197169 1669 ntBASIC10.33□□□□□ -0.76
Sh2d1aO88890 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Sh2d1aO88890 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sh2d1aO88890 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Sh2d1aO88890 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sh2d1aO88890 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sh2d1aO88890 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sh2d1aO88890 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sh2d1aO88890 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Sh2d1aO88890 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Sh2d1aO88890 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Sh2d1aO88890 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Sh2d1aO88890 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sh2d1aO88890 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms