Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.98□□□□□ -0.17
Hcn1O88704 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn1O88704 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn1O88704 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn1O88704 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Hcn1O88704 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn1O88704 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Hcn1O88704 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.98□□□□□ -0.17
Hcn1O88704 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn1O88704 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn1O88704 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn1O88704 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn1O88704 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn1O88704 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn1O88704 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.98□□□□□ -0.17
Hcn1O88704 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn1O88704 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn1O88704 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn1O88704 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn1O88704 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn1O88704 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn1O88704 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Hcn1O88704 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn1O88704 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn1O88704 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn1O88704 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn1O88704 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Hcn1O88704 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Hcn1O88704 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn1O88704 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn1O88704 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.97□□□□□ -0.17
Hcn1O88704 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.97□□□□□ -0.17
Hcn1O88704 Gm4995-201ENSMUST00000117247 432 ntBASIC13.97□□□□□ -0.17
Hcn1O88704 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.97□□□□□ -0.17
Hcn1O88704 Gm37935-201ENSMUST00000192012 982 ntBASIC13.97□□□□□ -0.17
Hcn1O88704 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.97□□□□□ -0.17
Hcn1O88704 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.97□□□□□ -0.17
Hcn1O88704 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn1O88704 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn1O88704 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn1O88704 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn1O88704 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn1O88704 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Hcn1O88704 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn1O88704 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn1O88704 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn1O88704 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Hcn1O88704 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn1O88704 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn1O88704 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn1O88704 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn1O88704 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.97□□□□□ -0.17
Hcn1O88704 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn1O88704 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.96□□□□□ -0.17
Hcn1O88704 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn1O88704 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn1O88704 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.96□□□□□ -0.17
Hcn1O88704 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn1O88704 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn1O88704 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn1O88704 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn1O88704 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn1O88704 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn1O88704 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn1O88704 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn1O88704 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn1O88704 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn1O88704 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.96□□□□□ -0.17
Hcn1O88704 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn1O88704 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Hcn1O88704 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn1O88704 Gm2213-201ENSMUST00000197485 688 ntBASIC13.96□□□□□ -0.17
Hcn1O88704 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.96□□□□□ -0.17
Hcn1O88704 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.96□□□□□ -0.17
Hcn1O88704 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn1O88704 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn1O88704 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn1O88704 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn1O88704 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Hcn1O88704 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
Hcn1O88704 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.96□□□□□ -0.17
Hcn1O88704 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn1O88704 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn1O88704 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn1O88704 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn1O88704 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hcn1O88704 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Hcn1O88704 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Hcn1O88704 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.18
Hcn1O88704 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hcn1O88704 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Hcn1O88704 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn1O88704 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn1O88704 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn1O88704 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn1O88704 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn1O88704 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn1O88704 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn1O88704 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn1O88704 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms