Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.51□□□□□ -0.41
Cldn1O88551 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.51□□□□□ -0.41
Cldn1O88551 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn1O88551 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn1O88551 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Cldn1O88551 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn1O88551 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn1O88551 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn1O88551 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn1O88551 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.51□□□□□ -0.41
Cldn1O88551 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn1O88551 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn1O88551 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn1O88551 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cldn1O88551 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn1O88551 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cldn1O88551 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cldn1O88551 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.51□□□□□ -0.41
Cldn1O88551 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.51□□□□□ -0.41
Cldn1O88551 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.51□□□□□ -0.41
Cldn1O88551 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.51□□□□□ -0.41
Cldn1O88551 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cldn1O88551 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.51□□□□□ -0.41
Cldn1O88551 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.51□□□□□ -0.41
Cldn1O88551 Gm6180-201ENSMUST00000065243 498 ntBASIC12.51□□□□□ -0.41
Cldn1O88551 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn1O88551 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn1O88551 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn1O88551 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Cldn1O88551 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn1O88551 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.51□□□□□ -0.41
Cldn1O88551 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cldn1O88551 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cldn1O88551 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn1O88551 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cldn1O88551 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn1O88551 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn1O88551 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cldn1O88551 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn1O88551 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn1O88551 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn1O88551 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cldn1O88551 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.5□□□□□ -0.41
Cldn1O88551 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Cldn1O88551 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn1O88551 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn1O88551 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn1O88551 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn1O88551 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn1O88551 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cldn1O88551 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn1O88551 Gm14722-201ENSMUST00000118943 689 ntBASIC12.5□□□□□ -0.41
Cldn1O88551 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.5□□□□□ -0.41
Cldn1O88551 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.5□□□□□ -0.41
Cldn1O88551 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.5□□□□□ -0.41
Cldn1O88551 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn1O88551 Gm24694-201ENSMUST00000180054 110 ntBASIC12.5□□□□□ -0.41
Cldn1O88551 Gm27663-201ENSMUST00000184839 110 ntBASIC12.5□□□□□ -0.41
Cldn1O88551 Gm28631-201ENSMUST00000190740 334 ntBASIC12.5□□□□□ -0.41
Cldn1O88551 Gm45384-201ENSMUST00000210451 277 ntBASIC12.5□□□□□ -0.41
Cldn1O88551 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.5□□□□□ -0.41
Cldn1O88551 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.5□□□□□ -0.41
Cldn1O88551 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn1O88551 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cldn1O88551 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Cldn1O88551 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.5□□□□□ -0.41
Cldn1O88551 Asic1-205ENSMUST00000228185 1818 ntBASIC12.5□□□□□ -0.41
Cldn1O88551 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn1O88551 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn1O88551 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn1O88551 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cldn1O88551 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn1O88551 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn1O88551 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn1O88551 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn1O88551 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn1O88551 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn1O88551 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cldn1O88551 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn1O88551 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn1O88551 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn1O88551 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn1O88551 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn1O88551 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn1O88551 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn1O88551 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn1O88551 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn1O88551 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn1O88551 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn1O88551 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn1O88551 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn1O88551 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cldn1O88551 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn1O88551 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn1O88551 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn1O88551 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn1O88551 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn1O88551 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.49□□□□□ -0.41
Cldn1O88551 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.49□□□□□ -0.41
Cldn1O88551 Gm11478-201ENSMUST00000117851 599 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms