Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.4□□□□□ -0.1
Pdlim1O70400 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim1O70400 Gm9824-201ENSMUST00000178707 561 ntBASIC14.4□□□□□ -0.1
Pdlim1O70400 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.4□□□□□ -0.1
Pdlim1O70400 Gm18049-201ENSMUST00000208909 581 ntBASIC14.4□□□□□ -0.1
Pdlim1O70400 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.4□□□□□ -0.1
Pdlim1O70400 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim1O70400 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim1O70400 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pdlim1O70400 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim1O70400 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim1O70400 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.4□□□□□ -0.1
Pdlim1O70400 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Pdlim1O70400 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim1O70400 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.4□□□□□ -0.1
Pdlim1O70400 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim1O70400 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
Pdlim1O70400 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pdlim1O70400 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim1O70400 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim1O70400 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.4□□□□□ -0.11
Pdlim1O70400 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pdlim1O70400 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.39□□□□□ -0.11
Pdlim1O70400 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim1O70400 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim1O70400 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim1O70400 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.39□□□□□ -0.11
Pdlim1O70400 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim1O70400 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim1O70400 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim1O70400 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pdlim1O70400 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim1O70400 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim1O70400 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.39□□□□□ -0.11
Pdlim1O70400 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.39□□□□□ -0.11
Pdlim1O70400 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pdlim1O70400 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.39□□□□□ -0.11
Pdlim1O70400 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.39□□□□□ -0.11
Pdlim1O70400 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.39□□□□□ -0.11
Pdlim1O70400 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim1O70400 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.39□□□□□ -0.11
Pdlim1O70400 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pdlim1O70400 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim1O70400 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pdlim1O70400 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim1O70400 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim1O70400 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim1O70400 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim1O70400 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim1O70400 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pdlim1O70400 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim1O70400 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.39□□□□□ -0.11
Pdlim1O70400 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim1O70400 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.39□□□□□ -0.11
Pdlim1O70400 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim1O70400 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim1O70400 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.39□□□□□ -0.11
Pdlim1O70400 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim1O70400 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim1O70400 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim1O70400 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Pdlim1O70400 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.38□□□□□ -0.11
Pdlim1O70400 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Pdlim1O70400 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim1O70400 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim1O70400 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim1O70400 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim1O70400 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim1O70400 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim1O70400 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim1O70400 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim1O70400 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim1O70400 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pdlim1O70400 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim1O70400 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim1O70400 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.38□□□□□ -0.11
Pdlim1O70400 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Pdlim1O70400 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim1O70400 Gm10275-202ENSMUST00000168697 495 ntBASIC14.38□□□□□ -0.11
Pdlim1O70400 Gm24158-201ENSMUST00000175263 71 ntBASIC14.38□□□□□ -0.11
Pdlim1O70400 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.38□□□□□ -0.11
Pdlim1O70400 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim1O70400 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.38□□□□□ -0.11
Pdlim1O70400 Gm10275-201ENSMUST00000092620 635 ntBASIC14.38□□□□□ -0.11
Pdlim1O70400 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim1O70400 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Pdlim1O70400 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim1O70400 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim1O70400 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim1O70400 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim1O70400 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim1O70400 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim1O70400 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Pdlim1O70400 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Pdlim1O70400 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim1O70400 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim1O70400 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim1O70400 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim1O70400 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.37□□□□□ -0.11
Pdlim1O70400 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms