Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf13O54965 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf13O54965 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rnf13O54965 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf13O54965 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf13O54965 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf13O54965 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf13O54965 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf13O54965 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf13O54965 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf13O54965 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Rnf13O54965 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf13O54965 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf13O54965 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf13O54965 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf13O54965 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf13O54965 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf13O54965 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.22□□□□□ -0.29
Rnf13O54965 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
Rnf13O54965 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rnf13O54965 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rnf13O54965 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf13O54965 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf13O54965 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf13O54965 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf13O54965 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.22□□□□□ -0.29
Rnf13O54965 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.22□□□□□ -0.29
Rnf13O54965 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf13O54965 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.22□□□□□ -0.29
Rnf13O54965 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf13O54965 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rnf13O54965 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf13O54965 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf13O54965 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf13O54965 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.22□□□□□ -0.29
Rnf13O54965 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf13O54965 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Rnf13O54965 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf13O54965 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
Rnf13O54965 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
Rnf13O54965 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf13O54965 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rnf13O54965 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf13O54965 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf13O54965 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf13O54965 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf13O54965 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.22□□□□□ -0.29
Rnf13O54965 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf13O54965 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf13O54965 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf13O54965 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.22□□□□□ -0.29
Rnf13O54965 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf13O54965 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.22□□□□□ -0.29
Rnf13O54965 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Rnf13O54965 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Rnf13O54965 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf13O54965 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf13O54965 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf13O54965 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf13O54965 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf13O54965 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf13O54965 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf13O54965 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf13O54965 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf13O54965 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf13O54965 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf13O54965 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf13O54965 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf13O54965 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf13O54965 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf13O54965 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rnf13O54965 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.21□□□□□ -0.29
Rnf13O54965 Gm5682-201ENSMUST00000173402 505 ntBASIC13.21□□□□□ -0.29
Rnf13O54965 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf13O54965 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf13O54965 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf13O54965 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf13O54965 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf13O54965 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.21□□□□□ -0.29
Rnf13O54965 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rnf13O54965 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf13O54965 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf13O54965 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf13O54965 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf13O54965 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.21□□□□□ -0.3
Rnf13O54965 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf13O54965 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf13O54965 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf13O54965 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf13O54965 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.2□□□□□ -0.3
Rnf13O54965 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf13O54965 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf13O54965 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf13O54965 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf13O54965 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf13O54965 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf13O54965 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf13O54965 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf13O54965 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf13O54965 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms