Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Per2O54943 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Per2O54943 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Per2O54943 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Per2O54943 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Per2O54943 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per2O54943 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Per2O54943 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per2O54943 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per2O54943 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per2O54943 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per2O54943 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per2O54943 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Per2O54943 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per2O54943 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Per2O54943 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.19■□□□□ 0.02
Per2O54943 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per2O54943 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per2O54943 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per2O54943 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Per2O54943 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Per2O54943 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per2O54943 Gm17968-201ENSMUST00000194902 784 ntBASIC15.19■□□□□ 0.02
Per2O54943 Olfr286-202ENSMUST00000205305 969 ntBASIC15.19■□□□□ 0.02
Per2O54943 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.19■□□□□ 0.02
Per2O54943 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.19■□□□□ 0.02
Per2O54943 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per2O54943 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per2O54943 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.19■□□□□ 0.02
Per2O54943 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Per2O54943 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per2O54943 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per2O54943 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per2O54943 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per2O54943 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per2O54943 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Per2O54943 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per2O54943 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Per2O54943 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per2O54943 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Per2O54943 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per2O54943 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per2O54943 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Per2O54943 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per2O54943 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Per2O54943 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Per2O54943 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Per2O54943 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Per2O54943 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per2O54943 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Per2O54943 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per2O54943 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per2O54943 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per2O54943 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Per2O54943 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.18■□□□□ 0.02
Per2O54943 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Per2O54943 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Per2O54943 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per2O54943 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per2O54943 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per2O54943 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per2O54943 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per2O54943 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per2O54943 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per2O54943 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per2O54943 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.18■□□□□ 0.02
Per2O54943 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Per2O54943 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per2O54943 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per2O54943 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Per2O54943 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per2O54943 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per2O54943 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.18■□□□□ 0.02
Per2O54943 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Per2O54943 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per2O54943 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Per2O54943 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per2O54943 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per2O54943 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Per2O54943 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Per2O54943 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.17■□□□□ 0.02
Per2O54943 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Per2O54943 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Per2O54943 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Per2O54943 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Per2O54943 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Per2O54943 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Per2O54943 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Per2O54943 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Per2O54943 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Per2O54943 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Per2O54943 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.17■□□□□ 0.02
Per2O54943 Gm9385-201ENSMUST00000117563 472 ntBASIC15.17■□□□□ 0.02
Per2O54943 Gm12260-201ENSMUST00000122447 411 ntBASIC15.17■□□□□ 0.02
Per2O54943 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Per2O54943 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.17■□□□□ 0.02
Per2O54943 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.17■□□□□ 0.02
Per2O54943 Gm9182-201ENSMUST00000217829 639 ntBASIC15.17■□□□□ 0.02
Per2O54943 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Per2O54943 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms