Protein–RNA interactions for Protein: J3KMS6

Gm21818, MCG122238, isoform CRA_a, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21818J3KMS6 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm21818J3KMS6 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Gm21818J3KMS6 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm21818J3KMS6 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm21818J3KMS6 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm21818J3KMS6 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm21818J3KMS6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm21818J3KMS6 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm21818J3KMS6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Gm21818J3KMS6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.49□□□□□ -0.41
Gm21818J3KMS6 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.49□□□□□ -0.41
Gm21818J3KMS6 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm21818J3KMS6 Gm5864-201ENSMUST00000202263 970 ntBASIC12.49□□□□□ -0.41
Gm21818J3KMS6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm21818J3KMS6 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm21818J3KMS6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.49□□□□□ -0.41
Gm21818J3KMS6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Gm21818J3KMS6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Gm21818J3KMS6 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm21818J3KMS6 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm21818J3KMS6 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm21818J3KMS6 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm21818J3KMS6 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm21818J3KMS6 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm21818J3KMS6 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Gm21818J3KMS6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm21818J3KMS6 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm21818J3KMS6 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm21818J3KMS6 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Gm13884-201ENSMUST00000118103 829 ntBASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Gm44357-201ENSMUST00000195897 142 ntBASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Gm19658-201ENSMUST00000196231 138 ntBASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Gm44367-201ENSMUST00000196836 138 ntBASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Gm44350-201ENSMUST00000197197 138 ntBASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Gm44390-201ENSMUST00000197533 144 ntBASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Gm44313-201ENSMUST00000198018 138 ntBASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Gm44486-201ENSMUST00000198508 138 ntBASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Gm44314-201ENSMUST00000199263 138 ntBASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Gm44394-201ENSMUST00000199558 138 ntBASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Gm44484-201ENSMUST00000199873 138 ntBASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Gm44466-201ENSMUST00000200264 138 ntBASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Gm44359-201ENSMUST00000200671 138 ntBASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.48□□□□□ -0.41
Gm21818J3KMS6 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm21818J3KMS6 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm21818J3KMS6 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm21818J3KMS6 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm21818J3KMS6 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm21818J3KMS6 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm21818J3KMS6 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm21818J3KMS6 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.47□□□□□ -0.41
Gm21818J3KMS6 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm21818J3KMS6 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Gm21818J3KMS6 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.47□□□□□ -0.41
Gm21818J3KMS6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm21818J3KMS6 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm21818J3KMS6 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm21818J3KMS6 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm21818J3KMS6 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.47□□□□□ -0.41
Gm21818J3KMS6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm21818J3KMS6 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm21818J3KMS6 Gm6296-201ENSMUST00000222599 943 ntBASIC12.47□□□□□ -0.41
Gm21818J3KMS6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm21818J3KMS6 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm21818J3KMS6 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Gm21818J3KMS6 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.47□□□□□ -0.41
Gm21818J3KMS6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Gm21818J3KMS6 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm21818J3KMS6 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm21818J3KMS6 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm21818J3KMS6 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Gm21818J3KMS6 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm21818J3KMS6 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm21818J3KMS6 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gm21818J3KMS6 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms