Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clrn2B2RVW2 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clrn2B2RVW2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clrn2B2RVW2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clrn2B2RVW2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clrn2B2RVW2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clrn2B2RVW2 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
Clrn2B2RVW2 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.82■□□□□ 0.28
Clrn2B2RVW2 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clrn2B2RVW2 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clrn2B2RVW2 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clrn2B2RVW2 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.82■□□□□ 0.28
Clrn2B2RVW2 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clrn2B2RVW2 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.82■□□□□ 0.28
Clrn2B2RVW2 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.82■□□□□ 0.28
Clrn2B2RVW2 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.82■□□□□ 0.28
Clrn2B2RVW2 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Clrn2B2RVW2 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clrn2B2RVW2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.82■□□□□ 0.28
Clrn2B2RVW2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clrn2B2RVW2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clrn2B2RVW2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clrn2B2RVW2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Clrn2B2RVW2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clrn2B2RVW2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Gm15460-201ENSMUST00000118147 391 ntBASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Gm15393-201ENSMUST00000120499 219 ntBASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.81■□□□□ 0.28
Clrn2B2RVW2 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clrn2B2RVW2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clrn2B2RVW2 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Clrn2B2RVW2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clrn2B2RVW2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clrn2B2RVW2 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clrn2B2RVW2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Clrn2B2RVW2 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.8■□□□□ 0.28
Clrn2B2RVW2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clrn2B2RVW2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clrn2B2RVW2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clrn2B2RVW2 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clrn2B2RVW2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clrn2B2RVW2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clrn2B2RVW2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clrn2B2RVW2 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.8■□□□□ 0.28
Clrn2B2RVW2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.8■□□□□ 0.28
Clrn2B2RVW2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.8■□□□□ 0.28
Clrn2B2RVW2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clrn2B2RVW2 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.8■□□□□ 0.28
Clrn2B2RVW2 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clrn2B2RVW2 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.8■□□□□ 0.28
Clrn2B2RVW2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clrn2B2RVW2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clrn2B2RVW2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clrn2B2RVW2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Clrn2B2RVW2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clrn2B2RVW2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clrn2B2RVW2 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clrn2B2RVW2 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.79■□□□□ 0.28
Clrn2B2RVW2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clrn2B2RVW2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clrn2B2RVW2 Gm12585-201ENSMUST00000117307 290 ntBASIC16.79■□□□□ 0.28
Clrn2B2RVW2 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clrn2B2RVW2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clrn2B2RVW2 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.79■□□□□ 0.28
Clrn2B2RVW2 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clrn2B2RVW2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Clrn2B2RVW2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clrn2B2RVW2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clrn2B2RVW2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clrn2B2RVW2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms