Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Gm15165-201ENSMUST00000118140 502 ntBASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 AC153881.2-201ENSMUST00000214877 204 ntBASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Gm17808-201ENSMUST00000200859 894 ntBASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Gm7506-201ENSMUST00000207758 815 ntBASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm12887B1AVM1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Gm12887B1AVM1 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm12887B1AVM1 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm12887B1AVM1 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.78□□□□□ -0.52
Gm12887B1AVM1 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gm12887B1AVM1 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm12887B1AVM1 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm12887B1AVM1 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Gm12887B1AVM1 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm12887B1AVM1 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm12887B1AVM1 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm12887B1AVM1 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm12887B1AVM1 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.78□□□□□ -0.52
Gm12887B1AVM1 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gm12887B1AVM1 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm12887B1AVM1 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm12887B1AVM1 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm12887B1AVM1 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm12887B1AVM1 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm12887B1AVM1 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Gm12887B1AVM1 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms