Protein–RNA interactions for Protein: A0A0U1RP08

1700028J19Rik, RIKEN cDNA 1700028J19 gene (Fragment), mousemouse

Predictions only

Length 172 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700028J19RikA0A0U1RP08 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.71□□□□□ -0.21
1700028J19RikA0A0U1RP08 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
1700028J19RikA0A0U1RP08 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
1700028J19RikA0A0U1RP08 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
1700028J19RikA0A0U1RP08 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
1700028J19RikA0A0U1RP08 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
1700028J19RikA0A0U1RP08 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
1700028J19RikA0A0U1RP08 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
1700028J19RikA0A0U1RP08 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
1700028J19RikA0A0U1RP08 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
1700028J19RikA0A0U1RP08 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
1700028J19RikA0A0U1RP08 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Gm9385-201ENSMUST00000117563 472 ntBASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Gm27741-201ENSMUST00000185060 237 ntBASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Gm45747-201ENSMUST00000212203 999 ntBASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
1700028J19RikA0A0U1RP08 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 Gm1401-201ENSMUST00000122048 772 ntBASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 Gm17968-201ENSMUST00000194902 784 ntBASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms