Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Gm45293-201ENSMUST00000209754 1812 ntBASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Gm37856-201ENSMUST00000191634 999 ntBASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Igkv8-27A0A0G2JF28 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Gm14451-201ENSMUST00000121581 1542 ntBASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Gm19164-201ENSMUST00000210667 640 ntBASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Arhgef4-208ENSMUST00000211073 171 ntBASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Gm18041-201ENSMUST00000218210 618 ntBASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Gm9987-201ENSMUST00000069768 567 ntBASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Il17rd-203ENSMUST00000225146 3366 ntBASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Igkv8-27A0A0G2JF28 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC9.11□□□□□ -0.95
Igkv8-27A0A0G2JF28 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Igkv8-27A0A0G2JF28 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Igkv8-27A0A0G2JF28 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Igkv8-27A0A0G2JF28 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Igkv8-27A0A0G2JF28 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Igkv8-27A0A0G2JF28 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Igkv8-27A0A0G2JF28 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Igkv8-27A0A0G2JF28 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms