Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm7556-201ENSMUST00000201178 1084 ntBASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm19164-201ENSMUST00000210667 640 ntBASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms