Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Gm12134-201ENSMUST00000122109 520 ntBASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Gm13036-201ENSMUST00000117799 748 ntBASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Gm15590-201ENSMUST00000078419 552 ntBASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5-4A0A075B652 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav5-4A0A075B652 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.21□□□□□ -0.46
Trav5-4A0A075B652 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav5-4A0A075B652 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav5-4A0A075B652 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Trav5-4A0A075B652 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav5-4A0A075B652 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trav5-4A0A075B652 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav5-4A0A075B652 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav5-4A0A075B652 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav5-4A0A075B652 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav5-4A0A075B652 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav5-4A0A075B652 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Gm18195-201ENSMUST00000207604 706 ntBASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms