Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Gm15039-201ENSMUST00000118914 875 ntBASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Mir6404-201ENSMUST00000183699 94 ntBASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Mir1668-201ENSMUST00000184114 107 ntBASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Gm43195-201ENSMUST00000200614 2332 ntBASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
Trav8-1A0A075B641 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav8-1A0A075B641 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trav8-1A0A075B641 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
Trav8-1A0A075B641 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav8-1A0A075B641 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav8-1A0A075B641 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trav8-1A0A075B641 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.73
Trav8-1A0A075B641 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav8-1A0A075B641 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav8-1A0A075B641 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav8-1A0A075B641 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav8-1A0A075B641 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav8-1A0A075B641 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav8-1A0A075B641 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav8-1A0A075B641 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav8-1A0A075B641 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav8-1A0A075B641 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC10.46□□□□□ -0.73
Trav8-1A0A075B641 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC10.46□□□□□ -0.73
Trav8-1A0A075B641 AC159205.6-201ENSMUST00000224935 887 ntBASIC10.46□□□□□ -0.73
Trav8-1A0A075B641 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav8-1A0A075B641 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav8-1A0A075B641 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav8-1A0A075B641 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav8-1A0A075B641 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav8-1A0A075B641 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC10.46□□□□□ -0.74
Trav8-1A0A075B641 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC10.46□□□□□ -0.74
Trav8-1A0A075B641 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav8-1A0A075B641 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav8-1A0A075B641 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav8-1A0A075B641 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Trav8-1A0A075B641 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav8-1A0A075B641 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav8-1A0A075B641 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav8-1A0A075B641 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav8-1A0A075B641 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC10.46□□□□□ -0.74
Trav8-1A0A075B641 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav8-1A0A075B641 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
Trav8-1A0A075B641 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav8-1A0A075B641 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.46□□□□□ -0.74
Trav8-1A0A075B641 Mmp14-206ENSMUST00000225641 3238 ntBASIC10.46□□□□□ -0.74
Trav8-1A0A075B641 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav8-1A0A075B641 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav8-1A0A075B641 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC10.46□□□□□ -0.74
Trav8-1A0A075B641 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav8-1A0A075B641 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Trav8-1A0A075B641 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Grk6-207ENSMUST00000225925 2769 ntBASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Gm10052-201ENSMUST00000168019 960 ntBASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Gm29257-201ENSMUST00000186115 639 ntBASIC10.45□□□□□ -0.74
Trav8-1A0A075B641 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms