Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h3Q9Z0Y9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Nr1h3Q9Z0Y9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h3Q9Z0Y9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Nr1h3Q9Z0Y9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h3Q9Z0Y9 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.87■□□□□ 0.13
Nr1h3Q9Z0Y9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h3Q9Z0Y9 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h3Q9Z0Y9 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Nr1h3Q9Z0Y9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h3Q9Z0Y9 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Nr1h3Q9Z0Y9 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h3Q9Z0Y9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
Nr1h3Q9Z0Y9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h3Q9Z0Y9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Nr1h3Q9Z0Y9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h3Q9Z0Y9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.86■□□□□ 0.13
Nr1h3Q9Z0Y9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h3Q9Z0Y9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h3Q9Z0Y9 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h3Q9Z0Y9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h3Q9Z0Y9 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h3Q9Z0Y9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.86■□□□□ 0.13
Nr1h3Q9Z0Y9 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.86■□□□□ 0.13
Nr1h3Q9Z0Y9 Gm9063-201ENSMUST00000223299 582 ntBASIC15.86■□□□□ 0.13
Nr1h3Q9Z0Y9 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h3Q9Z0Y9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h3Q9Z0Y9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h3Q9Z0Y9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h3Q9Z0Y9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Nr1h3Q9Z0Y9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.86■□□□□ 0.13
Nr1h3Q9Z0Y9 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h3Q9Z0Y9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h3Q9Z0Y9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h3Q9Z0Y9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1h3Q9Z0Y9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1h3Q9Z0Y9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1h3Q9Z0Y9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1h3Q9Z0Y9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1h3Q9Z0Y9 Gm5479-201ENSMUST00000160578 435 ntBASIC15.85■□□□□ 0.13
Nr1h3Q9Z0Y9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1h3Q9Z0Y9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Nr1h3Q9Z0Y9 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.85■□□□□ 0.13
Nr1h3Q9Z0Y9 Gm44344-201ENSMUST00000200287 129 ntBASIC15.85■□□□□ 0.13
Nr1h3Q9Z0Y9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1h3Q9Z0Y9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1h3Q9Z0Y9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Nr1h3Q9Z0Y9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1h3Q9Z0Y9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1h3Q9Z0Y9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Nr1h3Q9Z0Y9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.85■□□□□ 0.13
Nr1h3Q9Z0Y9 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Nr1h3Q9Z0Y9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Nr1h3Q9Z0Y9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1h3Q9Z0Y9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1h3Q9Z0Y9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1h3Q9Z0Y9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1h3Q9Z0Y9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1h3Q9Z0Y9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1h3Q9Z0Y9 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1h3Q9Z0Y9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.84■□□□□ 0.13
Nr1h3Q9Z0Y9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1h3Q9Z0Y9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1h3Q9Z0Y9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Nr1h3Q9Z0Y9 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.84■□□□□ 0.13
Nr1h3Q9Z0Y9 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1h3Q9Z0Y9 Gm27533-201ENSMUST00000183800 152 ntBASIC15.84■□□□□ 0.13
Nr1h3Q9Z0Y9 Gm27680-201ENSMUST00000184192 160 ntBASIC15.84■□□□□ 0.13
Nr1h3Q9Z0Y9 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Nr1h3Q9Z0Y9 Gm7730-201ENSMUST00000212486 454 ntBASIC15.84■□□□□ 0.13
Nr1h3Q9Z0Y9 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1h3Q9Z0Y9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1h3Q9Z0Y9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1h3Q9Z0Y9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1h3Q9Z0Y9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1h3Q9Z0Y9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.84■□□□□ 0.13
Nr1h3Q9Z0Y9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.84■□□□□ 0.13
Nr1h3Q9Z0Y9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Nr1h3Q9Z0Y9 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1h3Q9Z0Y9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1h3Q9Z0Y9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nr1h3Q9Z0Y9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nr1h3Q9Z0Y9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1h3Q9Z0Y9 Gm5566-201ENSMUST00000116118 459 ntBASIC15.83■□□□□ 0.12
Nr1h3Q9Z0Y9 Gm13823-201ENSMUST00000119930 345 ntBASIC15.83■□□□□ 0.12
Nr1h3Q9Z0Y9 Gm11424-201ENSMUST00000121929 829 ntBASIC15.83■□□□□ 0.12
Nr1h3Q9Z0Y9 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.83■□□□□ 0.12
Nr1h3Q9Z0Y9 Gm9719-201ENSMUST00000162765 543 ntBASIC15.83■□□□□ 0.12
Nr1h3Q9Z0Y9 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.83■□□□□ 0.12
Nr1h3Q9Z0Y9 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1h3Q9Z0Y9 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.83■□□□□ 0.12
Nr1h3Q9Z0Y9 Gm19087-201ENSMUST00000191430 946 ntBASIC15.83■□□□□ 0.12
Nr1h3Q9Z0Y9 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.83■□□□□ 0.12
Nr1h3Q9Z0Y9 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.83■□□□□ 0.12
Nr1h3Q9Z0Y9 Gm2423-201ENSMUST00000074863 733 ntBASIC15.83■□□□□ 0.12
Nr1h3Q9Z0Y9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1h3Q9Z0Y9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.83■□□□□ 0.12
Nr1h3Q9Z0Y9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1h3Q9Z0Y9 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1h3Q9Z0Y9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms