Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn9Q9Z0S7 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn9Q9Z0S7 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.05□□□□□ -0.16
Cldn9Q9Z0S7 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn9Q9Z0S7 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cldn9Q9Z0S7 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.05□□□□□ -0.16
Cldn9Q9Z0S7 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn9Q9Z0S7 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn9Q9Z0S7 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn9Q9Z0S7 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.05□□□□□ -0.16
Cldn9Q9Z0S7 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Cldn9Q9Z0S7 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.05□□□□□ -0.16
Cldn9Q9Z0S7 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn9Q9Z0S7 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn9Q9Z0S7 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn9Q9Z0S7 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn9Q9Z0S7 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn9Q9Z0S7 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn9Q9Z0S7 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn9Q9Z0S7 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn9Q9Z0S7 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn9Q9Z0S7 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Gm9385-201ENSMUST00000117563 472 ntBASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn9Q9Z0S7 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 Gm9182-201ENSMUST00000217829 639 ntBASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.03□□□□□ -0.16
Cldn9Q9Z0S7 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn9Q9Z0S7 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Cldn9Q9Z0S7 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn9Q9Z0S7 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn9Q9Z0S7 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn9Q9Z0S7 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn9Q9Z0S7 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn9Q9Z0S7 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms