Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lhx9Q9WUH2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Lhx9Q9WUH2 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.88□□□□□ -0.19
Lhx9Q9WUH2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.88□□□□□ -0.19
Lhx9Q9WUH2 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.88□□□□□ -0.19
Lhx9Q9WUH2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lhx9Q9WUH2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lhx9Q9WUH2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Lhx9Q9WUH2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Lhx9Q9WUH2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lhx9Q9WUH2 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lhx9Q9WUH2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lhx9Q9WUH2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lhx9Q9WUH2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Lhx9Q9WUH2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Gm23547-201ENSMUST00000158210 271 ntBASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Gm27618-201ENSMUST00000183671 60 ntBASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx9Q9WUH2 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Gm8410-201ENSMUST00000117225 605 ntBASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Gm18049-201ENSMUST00000208909 581 ntBASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx9Q9WUH2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Lhx9Q9WUH2 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx9Q9WUH2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.85□□□□□ -0.19
Lhx9Q9WUH2 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx9Q9WUH2 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx9Q9WUH2 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.85□□□□□ -0.19
Lhx9Q9WUH2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx9Q9WUH2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx9Q9WUH2 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.85□□□□□ -0.19
Lhx9Q9WUH2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Lhx9Q9WUH2 Gm13223-201ENSMUST00000118609 747 ntBASIC13.85□□□□□ -0.19
Lhx9Q9WUH2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.85□□□□□ -0.19
Lhx9Q9WUH2 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx9Q9WUH2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Lhx9Q9WUH2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms