Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Gm13418-201ENSMUST00000119097 944 ntBASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 AC147366.1-201ENSMUST00000227671 852 ntBASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf13bQ9ET35 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.47□□□□□ -0.57
Tnfrsf13bQ9ET35 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms