Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ripk4Q9ERK0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ripk4Q9ERK0 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ripk4Q9ERK0 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ripk4Q9ERK0 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ripk4Q9ERK0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Ripk4Q9ERK0 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.81■□□□□ 0.44
Ripk4Q9ERK0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.81■□□□□ 0.44
Ripk4Q9ERK0 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.81■□□□□ 0.44
Ripk4Q9ERK0 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.81■□□□□ 0.44
Ripk4Q9ERK0 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.81■□□□□ 0.44
Ripk4Q9ERK0 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ripk4Q9ERK0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Ripk4Q9ERK0 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ripk4Q9ERK0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ripk4Q9ERK0 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ripk4Q9ERK0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ripk4Q9ERK0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ripk4Q9ERK0 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ripk4Q9ERK0 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ripk4Q9ERK0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ripk4Q9ERK0 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ripk4Q9ERK0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ripk4Q9ERK0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ripk4Q9ERK0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ripk4Q9ERK0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ripk4Q9ERK0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ripk4Q9ERK0 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ripk4Q9ERK0 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ripk4Q9ERK0 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.8■□□□□ 0.44
Ripk4Q9ERK0 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.8■□□□□ 0.44
Ripk4Q9ERK0 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ripk4Q9ERK0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ripk4Q9ERK0 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ripk4Q9ERK0 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ripk4Q9ERK0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ripk4Q9ERK0 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ripk4Q9ERK0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.8■□□□□ 0.44
Ripk4Q9ERK0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ripk4Q9ERK0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ripk4Q9ERK0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ripk4Q9ERK0 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ripk4Q9ERK0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ripk4Q9ERK0 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ripk4Q9ERK0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ripk4Q9ERK0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ripk4Q9ERK0 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ripk4Q9ERK0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ripk4Q9ERK0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.79■□□□□ 0.44
Ripk4Q9ERK0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.79■□□□□ 0.44
Ripk4Q9ERK0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ripk4Q9ERK0 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ripk4Q9ERK0 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.79■□□□□ 0.44
Ripk4Q9ERK0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ripk4Q9ERK0 Gm13223-201ENSMUST00000118609 747 ntBASIC17.79■□□□□ 0.44
Ripk4Q9ERK0 Gm13453-201ENSMUST00000118708 357 ntBASIC17.79■□□□□ 0.44
Ripk4Q9ERK0 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.79■□□□□ 0.44
Ripk4Q9ERK0 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ripk4Q9ERK0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.79■□□□□ 0.44
Ripk4Q9ERK0 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ripk4Q9ERK0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ripk4Q9ERK0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.79■□□□□ 0.44
Ripk4Q9ERK0 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.79■□□□□ 0.44
Ripk4Q9ERK0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ripk4Q9ERK0 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ripk4Q9ERK0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ripk4Q9ERK0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ripk4Q9ERK0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ripk4Q9ERK0 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ripk4Q9ERK0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ripk4Q9ERK0 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 Mir8102-201ENSMUST00000184148 139 ntBASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 Gm43767-201ENSMUST00000198933 381 ntBASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 Gm5186-201ENSMUST00000218781 920 ntBASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ripk4Q9ERK0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ripk4Q9ERK0 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ripk4Q9ERK0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms