Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.63□□□□□ -0.39
Ssmem1Q9D9Y8 Gm9824-201ENSMUST00000178707 561 ntBASIC12.63□□□□□ -0.39
Ssmem1Q9D9Y8 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ssmem1Q9D9Y8 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.63□□□□□ -0.39
Ssmem1Q9D9Y8 Gm10253-201ENSMUST00000194270 940 ntBASIC12.63□□□□□ -0.39
Ssmem1Q9D9Y8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssmem1Q9D9Y8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssmem1Q9D9Y8 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ssmem1Q9D9Y8 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssmem1Q9D9Y8 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssmem1Q9D9Y8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssmem1Q9D9Y8 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.63□□□□□ -0.39
Ssmem1Q9D9Y8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssmem1Q9D9Y8 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ssmem1Q9D9Y8 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ssmem1Q9D9Y8 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ssmem1Q9D9Y8 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssmem1Q9D9Y8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 Mir449b-201ENSMUST00000104833 80 ntBASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 Gm7774-201ENSMUST00000200064 533 ntBASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 Olfr286-202ENSMUST00000205305 969 ntBASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.61□□□□□ -0.39
Ssmem1Q9D9Y8 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Gm18049-201ENSMUST00000208909 581 ntBASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms