Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Q9CYI0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Q9CYI0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.14■□□□□ 0.17
Q9CYI0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Q9CYI0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Q9CYI0 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.14■□□□□ 0.17
Q9CYI0 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Q9CYI0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Q9CYI0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Q9CYI0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Q9CYI0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Q9CYI0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Q9CYI0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Q9CYI0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Q9CYI0 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Q9CYI0 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Q9CYI0 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Q9CYI0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Q9CYI0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Q9CYI0 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.13■□□□□ 0.17
Q9CYI0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Q9CYI0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Q9CYI0 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.13■□□□□ 0.17
Q9CYI0 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.13■□□□□ 0.17
Q9CYI0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Q9CYI0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Q9CYI0 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.13■□□□□ 0.17
Q9CYI0 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.13■□□□□ 0.17
Q9CYI0 Gm2451-201ENSMUST00000199447 999 ntBASIC16.13■□□□□ 0.17
Q9CYI0 Gm10290-201ENSMUST00000200451 999 ntBASIC16.13■□□□□ 0.17
Q9CYI0 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.13■□□□□ 0.17
Q9CYI0 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.13■□□□□ 0.17
Q9CYI0 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Q9CYI0 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.13■□□□□ 0.17
Q9CYI0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Q9CYI0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Q9CYI0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.13■□□□□ 0.17
Q9CYI0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Q9CYI0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Q9CYI0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Q9CYI0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Q9CYI0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q9CYI0 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q9CYI0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Q9CYI0 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q9CYI0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q9CYI0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q9CYI0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q9CYI0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Q9CYI0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q9CYI0 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q9CYI0 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q9CYI0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.12■□□□□ 0.17
Q9CYI0 Gm13223-201ENSMUST00000118609 747 ntBASIC16.12■□□□□ 0.17
Q9CYI0 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.12■□□□□ 0.17
Q9CYI0 Gm5479-201ENSMUST00000160578 435 ntBASIC16.12■□□□□ 0.17
Q9CYI0 Gm25144-201ENSMUST00000179561 110 ntBASIC16.12■□□□□ 0.17
Q9CYI0 Gm25352-201ENSMUST00000179815 110 ntBASIC16.12■□□□□ 0.17
Q9CYI0 Gm9726-201ENSMUST00000180321 678 ntBASIC16.12■□□□□ 0.17
Q9CYI0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Q9CYI0 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.12■□□□□ 0.17
Q9CYI0 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q9CYI0 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q9CYI0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q9CYI0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q9CYI0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q9CYI0 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Q9CYI0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q9CYI0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q9CYI0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q9CYI0 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Q9CYI0 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q9CYI0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q9CYI0 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.12■□□□□ 0.17
Q9CYI0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Q9CYI0 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q9CYI0 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Q9CYI0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.12■□□□□ 0.17
Q9CYI0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Q9CYI0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Q9CYI0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Q9CYI0 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Q9CYI0 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Q9CYI0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q9CYI0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q9CYI0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Q9CYI0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q9CYI0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Q9CYI0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q9CYI0 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.11■□□□□ 0.17
Q9CYI0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q9CYI0 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q9CYI0 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Q9CYI0 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q9CYI0 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Q9CYI0 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Q9CYI0 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q9CYI0 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q9CYI0 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.11■□□□□ 0.17
Q9CYI0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms