Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pfdn1Q9CWM4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pfdn1Q9CWM4 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pfdn1Q9CWM4 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pfdn1Q9CWM4 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pfdn1Q9CWM4 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pfdn1Q9CWM4 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn1Q9CWM4 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn1Q9CWM4 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn1Q9CWM4 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn1Q9CWM4 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn1Q9CWM4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn1Q9CWM4 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn1Q9CWM4 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
Pfdn1Q9CWM4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn1Q9CWM4 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pfdn1Q9CWM4 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn1Q9CWM4 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Pfdn1Q9CWM4 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn1Q9CWM4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn1Q9CWM4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.84□□□□□ -0.35
Pfdn1Q9CWM4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn1Q9CWM4 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn1Q9CWM4 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn1Q9CWM4 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pfdn1Q9CWM4 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn1Q9CWM4 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Pfdn1Q9CWM4 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Pfdn1Q9CWM4 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn1Q9CWM4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.84□□□□□ -0.35
Pfdn1Q9CWM4 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn1Q9CWM4 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pfdn1Q9CWM4 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pfdn1Q9CWM4 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pfdn1Q9CWM4 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Pfdn1Q9CWM4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pfdn1Q9CWM4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pfdn1Q9CWM4 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Gm18666-201ENSMUST00000190039 958 ntBASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Pfdn1Q9CWM4 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 Gm18041-201ENSMUST00000218210 618 ntBASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn1Q9CWM4 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms