Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nipsnap3bQ9CQE1 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Gm17971-201ENSMUST00000190239 806 ntBASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nipsnap3bQ9CQE1 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nipsnap3bQ9CQE1 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
Nipsnap3bQ9CQE1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Nipsnap3bQ9CQE1 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nipsnap3bQ9CQE1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Nipsnap3bQ9CQE1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nipsnap3bQ9CQE1 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Nipsnap3bQ9CQE1 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nipsnap3bQ9CQE1 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nipsnap3bQ9CQE1 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Nipsnap3bQ9CQE1 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.39□□□□□ -0.11
Nipsnap3bQ9CQE1 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nipsnap3bQ9CQE1 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nipsnap3bQ9CQE1 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nipsnap3bQ9CQE1 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nipsnap3bQ9CQE1 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms