Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Use1Q9CQ56 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.82□□□□□ -0.2
Use1Q9CQ56 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.82□□□□□ -0.2
Use1Q9CQ56 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Use1Q9CQ56 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Use1Q9CQ56 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Use1Q9CQ56 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Use1Q9CQ56 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Use1Q9CQ56 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Use1Q9CQ56 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Use1Q9CQ56 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Use1Q9CQ56 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Use1Q9CQ56 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Use1Q9CQ56 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Use1Q9CQ56 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Use1Q9CQ56 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Use1Q9CQ56 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.82□□□□□ -0.2
Use1Q9CQ56 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Use1Q9CQ56 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Use1Q9CQ56 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Use1Q9CQ56 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Use1Q9CQ56 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Use1Q9CQ56 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.81□□□□□ -0.2
Use1Q9CQ56 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.81□□□□□ -0.2
Use1Q9CQ56 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.81□□□□□ -0.2
Use1Q9CQ56 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.81□□□□□ -0.2
Use1Q9CQ56 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Use1Q9CQ56 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Use1Q9CQ56 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Use1Q9CQ56 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Use1Q9CQ56 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Use1Q9CQ56 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Use1Q9CQ56 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Use1Q9CQ56 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.8□□□□□ -0.2
Use1Q9CQ56 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Use1Q9CQ56 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Use1Q9CQ56 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Use1Q9CQ56 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.8□□□□□ -0.2
Use1Q9CQ56 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Use1Q9CQ56 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.8□□□□□ -0.2
Use1Q9CQ56 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.8□□□□□ -0.2
Use1Q9CQ56 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Use1Q9CQ56 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Use1Q9CQ56 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Use1Q9CQ56 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Use1Q9CQ56 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Use1Q9CQ56 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Use1Q9CQ56 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Use1Q9CQ56 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Use1Q9CQ56 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Use1Q9CQ56 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.8□□□□□ -0.2
Use1Q9CQ56 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Use1Q9CQ56 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Use1Q9CQ56 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Use1Q9CQ56 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Use1Q9CQ56 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Use1Q9CQ56 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Use1Q9CQ56 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.79□□□□□ -0.2
Use1Q9CQ56 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms