Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.8□□□□□ -0.2
Ska1Q9CPV1 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Gm25990-201ENSMUST00000102440 86 ntBASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Gm7222-201ENSMUST00000117512 906 ntBASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Gm6089-201ENSMUST00000197666 938 ntBASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Gm34391-201ENSMUST00000203706 907 ntBASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ska1Q9CPV1 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.79□□□□□ -0.2
Ska1Q9CPV1 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ska1Q9CPV1 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ska1Q9CPV1 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.79□□□□□ -0.2
Ska1Q9CPV1 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Gm10499-201ENSMUST00000174094 934 ntBASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Gm37153-201ENSMUST00000193637 231 ntBASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Gm44357-201ENSMUST00000195897 142 ntBASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Gm19658-201ENSMUST00000196231 138 ntBASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Gm44367-201ENSMUST00000196836 138 ntBASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Gm44350-201ENSMUST00000197197 138 ntBASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Gm44390-201ENSMUST00000197533 144 ntBASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Gm44313-201ENSMUST00000198018 138 ntBASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Gm44486-201ENSMUST00000198508 138 ntBASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Gm44314-201ENSMUST00000199263 138 ntBASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Gm44394-201ENSMUST00000199558 138 ntBASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Gm44484-201ENSMUST00000199873 138 ntBASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Gm44466-201ENSMUST00000200264 138 ntBASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Gm44359-201ENSMUST00000200671 138 ntBASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ska1Q9CPV1 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms