Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim16Q99PP9 Gm13597-201ENSMUST00000121239 375 ntBASIC14.3□□□□□ -0.12
Trim16Q99PP9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim16Q99PP9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim16Q99PP9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim16Q99PP9 Gm43514-201ENSMUST00000198852 424 ntBASIC14.3□□□□□ -0.12
Trim16Q99PP9 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim16Q99PP9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim16Q99PP9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim16Q99PP9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim16Q99PP9 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim16Q99PP9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim16Q99PP9 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim16Q99PP9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim16Q99PP9 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim16Q99PP9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim16Q99PP9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim16Q99PP9 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Trim16Q99PP9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim16Q99PP9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim16Q99PP9 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim16Q99PP9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.3□□□□□ -0.12
Trim16Q99PP9 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.3□□□□□ -0.12
Trim16Q99PP9 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim16Q99PP9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim16Q99PP9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim16Q99PP9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Gm9727-201ENSMUST00000161387 555 ntBASIC14.29□□□□□ -0.12
Trim16Q99PP9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim16Q99PP9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim16Q99PP9 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim16Q99PP9 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.28□□□□□ -0.12
Trim16Q99PP9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.28□□□□□ -0.12
Trim16Q99PP9 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim16Q99PP9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim16Q99PP9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.28□□□□□ -0.12
Trim16Q99PP9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.28□□□□□ -0.12
Trim16Q99PP9 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim16Q99PP9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.28□□□□□ -0.12
Trim16Q99PP9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim16Q99PP9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim16Q99PP9 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim16Q99PP9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms