Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Gm27300-201ENSMUST00000184085 97 ntBASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Gm27335-201ENSMUST00000184758 97 ntBASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Psmb5-202ENSMUST00000227257 622 ntBASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Chmp1b1Q99LU0 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Gm14140-201ENSMUST00000119999 995 ntBASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Gm12260-201ENSMUST00000122447 411 ntBASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Gm8000-201ENSMUST00000188378 592 ntBASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Chmp1b1Q99LU0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms