Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col20a1Q923P0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col20a1Q923P0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.2■□□□□ 0.34
Col20a1Q923P0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Col20a1Q923P0 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col20a1Q923P0 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.2■□□□□ 0.34
Col20a1Q923P0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col20a1Q923P0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col20a1Q923P0 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col20a1Q923P0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col20a1Q923P0 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col20a1Q923P0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col20a1Q923P0 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col20a1Q923P0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.2■□□□□ 0.34
Col20a1Q923P0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col20a1Q923P0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col20a1Q923P0 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col20a1Q923P0 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.19■□□□□ 0.34
Col20a1Q923P0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col20a1Q923P0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col20a1Q923P0 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col20a1Q923P0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col20a1Q923P0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col20a1Q923P0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col20a1Q923P0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col20a1Q923P0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col20a1Q923P0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col20a1Q923P0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col20a1Q923P0 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col20a1Q923P0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col20a1Q923P0 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col20a1Q923P0 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col20a1Q923P0 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col20a1Q923P0 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col20a1Q923P0 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Col20a1Q923P0 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC17.19■□□□□ 0.34
Col20a1Q923P0 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col20a1Q923P0 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Col20a1Q923P0 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col20a1Q923P0 Gm7730-201ENSMUST00000212486 454 ntBASIC17.19■□□□□ 0.34
Col20a1Q923P0 AC238811.1-201ENSMUST00000225302 441 ntBASIC17.19■□□□□ 0.34
Col20a1Q923P0 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Col20a1Q923P0 Syt7-204ENSMUST00000223586 1344 ntBASIC17.19■□□□□ 0.34
Col20a1Q923P0 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col20a1Q923P0 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col20a1Q923P0 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col20a1Q923P0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col20a1Q923P0 BC001981-202ENSMUST00000191393 1545 ntBASIC17.18■□□□□ 0.34
Col20a1Q923P0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col20a1Q923P0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col20a1Q923P0 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col20a1Q923P0 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col20a1Q923P0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col20a1Q923P0 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col20a1Q923P0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col20a1Q923P0 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col20a1Q923P0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col20a1Q923P0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col20a1Q923P0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col20a1Q923P0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col20a1Q923P0 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col20a1Q923P0 Cd63-ps-201ENSMUST00000145417 875 ntBASIC17.18■□□□□ 0.34
Col20a1Q923P0 Gm23547-201ENSMUST00000158210 271 ntBASIC17.18■□□□□ 0.34
Col20a1Q923P0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Col20a1Q923P0 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC17.18■□□□□ 0.34
Col20a1Q923P0 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.18■□□□□ 0.34
Col20a1Q923P0 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col20a1Q923P0 Gm9229-201ENSMUST00000222777 126 ntBASIC17.18■□□□□ 0.34
Col20a1Q923P0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col20a1Q923P0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col20a1Q923P0 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col20a1Q923P0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col20a1Q923P0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col20a1Q923P0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col20a1Q923P0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col20a1Q923P0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col20a1Q923P0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col20a1Q923P0 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col20a1Q923P0 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col20a1Q923P0 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Col20a1Q923P0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col20a1Q923P0 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Col20a1Q923P0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col20a1Q923P0 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col20a1Q923P0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col20a1Q923P0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col20a1Q923P0 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col20a1Q923P0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Col20a1Q923P0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col20a1Q923P0 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.17■□□□□ 0.34
Col20a1Q923P0 Gm14042-201ENSMUST00000120139 833 ntBASIC17.17■□□□□ 0.34
Col20a1Q923P0 Gm24694-201ENSMUST00000180054 110 ntBASIC17.17■□□□□ 0.34
Col20a1Q923P0 Gm27663-201ENSMUST00000184839 110 ntBASIC17.17■□□□□ 0.34
Col20a1Q923P0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col20a1Q923P0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col20a1Q923P0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col20a1Q923P0 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col20a1Q923P0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms