Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Smc1bQ920F6 Gm8410-201ENSMUST00000117225 605 ntBASIC16.88■□□□□ 0.29
Smc1bQ920F6 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.88■□□□□ 0.29
Smc1bQ920F6 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1bQ920F6 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1bQ920F6 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Smc1bQ920F6 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1bQ920F6 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1bQ920F6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1bQ920F6 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1bQ920F6 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1bQ920F6 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1bQ920F6 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Smc1bQ920F6 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1bQ920F6 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Smc1bQ920F6 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1bQ920F6 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1bQ920F6 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1bQ920F6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1bQ920F6 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.87■□□□□ 0.29
Smc1bQ920F6 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1bQ920F6 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1bQ920F6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1bQ920F6 Gm2810-201ENSMUST00000118681 990 ntBASIC16.87■□□□□ 0.29
Smc1bQ920F6 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.87■□□□□ 0.29
Smc1bQ920F6 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Smc1bQ920F6 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Smc1bQ920F6 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.87■□□□□ 0.29
Smc1bQ920F6 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.87■□□□□ 0.29
Smc1bQ920F6 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.87■□□□□ 0.29
Smc1bQ920F6 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1bQ920F6 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1bQ920F6 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1bQ920F6 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1bQ920F6 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Smc1bQ920F6 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1bQ920F6 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1bQ920F6 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1bQ920F6 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1bQ920F6 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1bQ920F6 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1bQ920F6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1bQ920F6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1bQ920F6 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1bQ920F6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1bQ920F6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.86■□□□□ 0.29
Smc1bQ920F6 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1bQ920F6 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1bQ920F6 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.86■□□□□ 0.29
Smc1bQ920F6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1bQ920F6 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1bQ920F6 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1bQ920F6 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1bQ920F6 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1bQ920F6 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1bQ920F6 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1bQ920F6 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1bQ920F6 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1bQ920F6 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1bQ920F6 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1bQ920F6 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.85■□□□□ 0.29
Smc1bQ920F6 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1bQ920F6 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1bQ920F6 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1bQ920F6 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1bQ920F6 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1bQ920F6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1bQ920F6 Gm11543-201ENSMUST00000120758 370 ntBASIC16.85■□□□□ 0.29
Smc1bQ920F6 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.85■□□□□ 0.29
Smc1bQ920F6 Gm8318-201ENSMUST00000182954 872 ntBASIC16.85■□□□□ 0.29
Smc1bQ920F6 Gm18187-201ENSMUST00000196476 984 ntBASIC16.85■□□□□ 0.29
Smc1bQ920F6 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Smc1bQ920F6 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.85■□□□□ 0.29
Smc1bQ920F6 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Smc1bQ920F6 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Smc1bQ920F6 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1bQ920F6 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1bQ920F6 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1bQ920F6 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1bQ920F6 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1bQ920F6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1bQ920F6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Smc1bQ920F6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1bQ920F6 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1bQ920F6 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Smc1bQ920F6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1bQ920F6 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.84■□□□□ 0.29
Smc1bQ920F6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1bQ920F6 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.84■□□□□ 0.29
Smc1bQ920F6 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1bQ920F6 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1bQ920F6 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1bQ920F6 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1bQ920F6 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Smc1bQ920F6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1bQ920F6 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1bQ920F6 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1bQ920F6 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1bQ920F6 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1bQ920F6 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms