Protein–RNA interactions for Protein: Q91Y14

Pcdha6, Pcdha6 protein, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha6Q91Y14 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha6Q91Y14 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha6Q91Y14 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha6Q91Y14 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
Pcdha6Q91Y14 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Gm5177-201ENSMUST00000183092 997 ntBASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha6Q91Y14 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 Gm16026-204ENSMUST00000162652 683 ntBASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 Gm18733-201ENSMUST00000173950 856 ntBASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha6Q91Y14 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdha6Q91Y14 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdha6Q91Y14 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Gm14140-201ENSMUST00000119999 995 ntBASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Gm27741-201ENSMUST00000185060 237 ntBASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Gm2451-201ENSMUST00000199447 999 ntBASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Gm10290-201ENSMUST00000200451 999 ntBASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Thap2-203ENSMUST00000218989 527 ntBASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha6Q91Y14 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms