Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb18Q91Y02 Gm27533-201ENSMUST00000183800 152 ntBASIC15.28■□□□□ 0.04
Pcdhb18Q91Y02 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb18Q91Y02 Gm44344-201ENSMUST00000200287 129 ntBASIC15.28■□□□□ 0.04
Pcdhb18Q91Y02 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.28■□□□□ 0.04
Pcdhb18Q91Y02 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb18Q91Y02 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb18Q91Y02 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb18Q91Y02 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb18Q91Y02 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb18Q91Y02 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb18Q91Y02 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.28■□□□□ 0.04
Pcdhb18Q91Y02 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb18Q91Y02 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb18Q91Y02 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdhb18Q91Y02 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb18Q91Y02 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb18Q91Y02 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pcdhb18Q91Y02 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb18Q91Y02 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb18Q91Y02 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb18Q91Y02 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhb18Q91Y02 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb18Q91Y02 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.27■□□□□ 0.04
Pcdhb18Q91Y02 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb18Q91Y02 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb18Q91Y02 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhb18Q91Y02 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb18Q91Y02 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pcdhb18Q91Y02 Gm13823-201ENSMUST00000119930 345 ntBASIC15.27■□□□□ 0.04
Pcdhb18Q91Y02 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.27■□□□□ 0.04
Pcdhb18Q91Y02 Gm7730-201ENSMUST00000212486 454 ntBASIC15.27■□□□□ 0.04
Pcdhb18Q91Y02 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb18Q91Y02 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.27■□□□□ 0.04
Pcdhb18Q91Y02 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pcdhb18Q91Y02 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.27■□□□□ 0.03
Pcdhb18Q91Y02 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb18Q91Y02 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb18Q91Y02 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb18Q91Y02 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Pcdhb18Q91Y02 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb18Q91Y02 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb18Q91Y02 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb18Q91Y02 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb18Q91Y02 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb18Q91Y02 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.26■□□□□ 0.03
Pcdhb18Q91Y02 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb18Q91Y02 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhb18Q91Y02 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb18Q91Y02 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb18Q91Y02 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb18Q91Y02 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb18Q91Y02 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb18Q91Y02 Gm5479-201ENSMUST00000160578 435 ntBASIC15.26■□□□□ 0.03
Pcdhb18Q91Y02 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhb18Q91Y02 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb18Q91Y02 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb18Q91Y02 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb18Q91Y02 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb18Q91Y02 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb18Q91Y02 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb18Q91Y02 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb18Q91Y02 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Gm5566-201ENSMUST00000116118 459 ntBASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Gm27680-201ENSMUST00000184192 160 ntBASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb18Q91Y02 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms