Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Gm14042-201ENSMUST00000120139 833 ntBASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 AC154239.3-201ENSMUST00000226933 674 ntBASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Ldb3-207ENSMUST00000227819 1499 ntBASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb5Q91XZ5 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb5Q91XZ5 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Pcdhb5Q91XZ5 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb5Q91XZ5 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb5Q91XZ5 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.14■□□□□ 0.33
Pcdhb5Q91XZ5 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb5Q91XZ5 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdhb5Q91XZ5 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb5Q91XZ5 Gm6916-202ENSMUST00000205523 195 ntBASIC17.14■□□□□ 0.33
Pcdhb5Q91XZ5 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC17.14■□□□□ 0.33
Pcdhb5Q91XZ5 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhb5Q91XZ5 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhb5Q91XZ5 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb5Q91XZ5 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pcdhb5Q91XZ5 BC001981-202ENSMUST00000191393 1545 ntBASIC17.14■□□□□ 0.33
Pcdhb5Q91XZ5 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb5Q91XZ5 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb5Q91XZ5 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb5Q91XZ5 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb5Q91XZ5 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb5Q91XZ5 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb5Q91XZ5 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb5Q91XZ5 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb5Q91XZ5 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb5Q91XZ5 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb5Q91XZ5 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Gm10275-202ENSMUST00000168697 495 ntBASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Gm10275-201ENSMUST00000092620 635 ntBASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb5Q91XZ5 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms