Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb6Q91XZ4 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb6Q91XZ4 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Pcdhb6Q91XZ4 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb6Q91XZ4 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Gm4995-201ENSMUST00000117247 432 ntBASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb6Q91XZ4 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Gm11543-201ENSMUST00000120758 370 ntBASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb6Q91XZ4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Gm18057-201ENSMUST00000208220 503 ntBASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms