Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sh3d19Q91X43 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sh3d19Q91X43 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Sh3d19Q91X43 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sh3d19Q91X43 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.21■□□□□ 0.02
Sh3d19Q91X43 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.2■□□□□ 0.02
Sh3d19Q91X43 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d19Q91X43 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d19Q91X43 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d19Q91X43 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d19Q91X43 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d19Q91X43 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d19Q91X43 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d19Q91X43 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d19Q91X43 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Sh3d19Q91X43 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d19Q91X43 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.2■□□□□ 0.02
Sh3d19Q91X43 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d19Q91X43 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d19Q91X43 Gm27680-201ENSMUST00000184192 160 ntBASIC15.2■□□□□ 0.02
Sh3d19Q91X43 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.2■□□□□ 0.02
Sh3d19Q91X43 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d19Q91X43 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d19Q91X43 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d19Q91X43 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Sh3d19Q91X43 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d19Q91X43 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d19Q91X43 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d19Q91X43 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.2■□□□□ 0.02
Sh3d19Q91X43 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Gm10275-202ENSMUST00000168697 495 ntBASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Gm17837-201ENSMUST00000186435 985 ntBASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Gm10275-201ENSMUST00000092620 635 ntBASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d19Q91X43 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Efs-202ENSMUST00000227037 2540 ntBASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Gm24543-201ENSMUST00000103867 82 ntBASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Gm12428-201ENSMUST00000119844 727 ntBASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Gm6222-201ENSMUST00000120787 396 ntBASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Gm27631-201ENSMUST00000184163 466 ntBASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d19Q91X43 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.17■□□□□ 0.02
Sh3d19Q91X43 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.17■□□□□ 0.02
Sh3d19Q91X43 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d19Q91X43 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d19Q91X43 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d19Q91X43 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Sh3d19Q91X43 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d19Q91X43 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d19Q91X43 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d19Q91X43 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms