Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx54Q8K4L0 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx54Q8K4L0 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx54Q8K4L0 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC18.96■□□□□ 0.63
Ddx54Q8K4L0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
Ddx54Q8K4L0 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Ddx54Q8K4L0 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx54Q8K4L0 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx54Q8K4L0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC18.96■□□□□ 0.63
Ddx54Q8K4L0 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx54Q8K4L0 Gm45880-201ENSMUST00000213041 853 ntBASIC18.96■□□□□ 0.63
Ddx54Q8K4L0 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx54Q8K4L0 Gm17383-201ENSMUST00000078739 1041 ntBASIC18.96■□□□□ 0.63
Ddx54Q8K4L0 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx54Q8K4L0 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Ddx54Q8K4L0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx54Q8K4L0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.96■□□□□ 0.63
Ddx54Q8K4L0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx54Q8K4L0 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx54Q8K4L0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx54Q8K4L0 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.95■□□□□ 0.62
Ddx54Q8K4L0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Ddx54Q8K4L0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx54Q8K4L0 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx54Q8K4L0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ddx54Q8K4L0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx54Q8K4L0 Gm12384-201ENSMUST00000119228 919 ntBASIC18.95■□□□□ 0.62
Ddx54Q8K4L0 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC18.95■□□□□ 0.62
Ddx54Q8K4L0 Gm16570-201ENSMUST00000161951 436 ntBASIC18.95■□□□□ 0.62
Ddx54Q8K4L0 Gm4804-201ENSMUST00000182234 999 ntBASIC18.95■□□□□ 0.62
Ddx54Q8K4L0 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx54Q8K4L0 Gm42442-201ENSMUST00000197951 1133 ntBASIC18.95■□□□□ 0.62
Ddx54Q8K4L0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC18.95■□□□□ 0.62
Ddx54Q8K4L0 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx54Q8K4L0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx54Q8K4L0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx54Q8K4L0 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx54Q8K4L0 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx54Q8K4L0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx54Q8K4L0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ddx54Q8K4L0 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Ddx54Q8K4L0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx54Q8K4L0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx54Q8K4L0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx54Q8K4L0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 Gm43822-201ENSMUST00000200285 476 ntBASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx54Q8K4L0 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx54Q8K4L0 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Ddx54Q8K4L0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx54Q8K4L0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx54Q8K4L0 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Ddx54Q8K4L0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx54Q8K4L0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Ddx54Q8K4L0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx54Q8K4L0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx54Q8K4L0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx54Q8K4L0 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx54Q8K4L0 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx54Q8K4L0 Rn7s1-201ENSMUST00000174924 300 ntBASIC18.93■□□□□ 0.62
Ddx54Q8K4L0 Rn7s2-201ENSMUST00000175032 300 ntBASIC18.93■□□□□ 0.62
Ddx54Q8K4L0 Gm26461-201ENSMUST00000175064 290 ntBASIC18.93■□□□□ 0.62
Ddx54Q8K4L0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC18.93■□□□□ 0.62
Ddx54Q8K4L0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx54Q8K4L0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx54Q8K4L0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx54Q8K4L0 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.92■□□□□ 0.62
Ddx54Q8K4L0 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx54Q8K4L0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ddx54Q8K4L0 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx54Q8K4L0 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx54Q8K4L0 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx54Q8K4L0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC18.92■□□□□ 0.62
Ddx54Q8K4L0 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx54Q8K4L0 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms