Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip3Q8CHD8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip3Q8CHD8 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip3Q8CHD8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip3Q8CHD8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rab11fip3Q8CHD8 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip3Q8CHD8 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip3Q8CHD8 BC001981-202ENSMUST00000191393 1545 ntBASIC18.85■□□□□ 0.61
Rab11fip3Q8CHD8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab11fip3Q8CHD8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.85■□□□□ 0.61
Rab11fip3Q8CHD8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab11fip3Q8CHD8 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab11fip3Q8CHD8 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rab11fip3Q8CHD8 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rab11fip3Q8CHD8 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab11fip3Q8CHD8 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC18.85■□□□□ 0.61
Rab11fip3Q8CHD8 Gm15487-201ENSMUST00000122373 465 ntBASIC18.85■□□□□ 0.61
Rab11fip3Q8CHD8 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rab11fip3Q8CHD8 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC18.85■□□□□ 0.61
Rab11fip3Q8CHD8 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC18.85■□□□□ 0.61
Rab11fip3Q8CHD8 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC18.85■□□□□ 0.61
Rab11fip3Q8CHD8 AC238811.1-201ENSMUST00000225302 441 ntBASIC18.85■□□□□ 0.61
Rab11fip3Q8CHD8 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab11fip3Q8CHD8 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC18.85■□□□□ 0.61
Rab11fip3Q8CHD8 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab11fip3Q8CHD8 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Rab11fip3Q8CHD8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab11fip3Q8CHD8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab11fip3Q8CHD8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab11fip3Q8CHD8 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab11fip3Q8CHD8 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Gm7730-201ENSMUST00000212486 454 ntBASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 AC121804.3-201ENSMUST00000223420 295 ntBASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Mir125a-201ENSMUST00000083545 68 ntBASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip3Q8CHD8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rab11fip3Q8CHD8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rab11fip3Q8CHD8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC18.83■□□□□ 0.61
Rab11fip3Q8CHD8 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rab11fip3Q8CHD8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rab11fip3Q8CHD8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rab11fip3Q8CHD8 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.83■□□□□ 0.61
Rab11fip3Q8CHD8 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.83■□□□□ 0.61
Rab11fip3Q8CHD8 Syt7-204ENSMUST00000223586 1344 ntBASIC18.83■□□□□ 0.61
Rab11fip3Q8CHD8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rab11fip3Q8CHD8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rab11fip3Q8CHD8 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rab11fip3Q8CHD8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rab11fip3Q8CHD8 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rab11fip3Q8CHD8 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC18.83■□□□□ 0.6
Rab11fip3Q8CHD8 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC18.83■□□□□ 0.6
Rab11fip3Q8CHD8 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rab11fip3Q8CHD8 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rab11fip3Q8CHD8 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC18.83■□□□□ 0.6
Rab11fip3Q8CHD8 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rab11fip3Q8CHD8 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rab11fip3Q8CHD8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Rab11fip3Q8CHD8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rab11fip3Q8CHD8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Rab11fip3Q8CHD8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rab11fip3Q8CHD8 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rab11fip3Q8CHD8 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rab11fip3Q8CHD8 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rab11fip3Q8CHD8 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rab11fip3Q8CHD8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rab11fip3Q8CHD8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rab11fip3Q8CHD8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab11fip3Q8CHD8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rab11fip3Q8CHD8 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rab11fip3Q8CHD8 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab11fip3Q8CHD8 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rab11fip3Q8CHD8 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab11fip3Q8CHD8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC18.82■□□□□ 0.6
Rab11fip3Q8CHD8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab11fip3Q8CHD8 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms