Protein–RNA interactions for Protein: Q8CH72

Trim32, E3 ubiquitin-protein ligase TRIM32, mousemouse

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim32Q8CH72 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim32Q8CH72 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Trim32Q8CH72 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim32Q8CH72 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim32Q8CH72 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.37■□□□□ 0.21
Trim32Q8CH72 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim32Q8CH72 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim32Q8CH72 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim32Q8CH72 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim32Q8CH72 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim32Q8CH72 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim32Q8CH72 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim32Q8CH72 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Trim32Q8CH72 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim32Q8CH72 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim32Q8CH72 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim32Q8CH72 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim32Q8CH72 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim32Q8CH72 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Trim32Q8CH72 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.36■□□□□ 0.21
Trim32Q8CH72 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim32Q8CH72 Gm9229-201ENSMUST00000222777 126 ntBASIC16.36■□□□□ 0.21
Trim32Q8CH72 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim32Q8CH72 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim32Q8CH72 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim32Q8CH72 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim32Q8CH72 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim32Q8CH72 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim32Q8CH72 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim32Q8CH72 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim32Q8CH72 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim32Q8CH72 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim32Q8CH72 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trim32Q8CH72 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trim32Q8CH72 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.36■□□□□ 0.21
Trim32Q8CH72 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim32Q8CH72 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim32Q8CH72 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trim32Q8CH72 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim32Q8CH72 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim32Q8CH72 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim32Q8CH72 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim32Q8CH72 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim32Q8CH72 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim32Q8CH72 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Trim32Q8CH72 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim32Q8CH72 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim32Q8CH72 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trim32Q8CH72 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.35■□□□□ 0.21
Trim32Q8CH72 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim32Q8CH72 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim32Q8CH72 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.35■□□□□ 0.21
Trim32Q8CH72 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Trim32Q8CH72 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim32Q8CH72 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim32Q8CH72 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim32Q8CH72 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim32Q8CH72 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim32Q8CH72 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim32Q8CH72 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim32Q8CH72 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim32Q8CH72 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim32Q8CH72 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim32Q8CH72 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim32Q8CH72 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim32Q8CH72 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.34■□□□□ 0.21
Trim32Q8CH72 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim32Q8CH72 Gm11918-201ENSMUST00000121660 179 ntBASIC16.34■□□□□ 0.21
Trim32Q8CH72 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim32Q8CH72 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim32Q8CH72 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.34■□□□□ 0.21
Trim32Q8CH72 Gm42660-201ENSMUST00000197733 947 ntBASIC16.34■□□□□ 0.21
Trim32Q8CH72 Gm6266-201ENSMUST00000203844 806 ntBASIC16.34■□□□□ 0.21
Trim32Q8CH72 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.34■□□□□ 0.21
Trim32Q8CH72 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trim32Q8CH72 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trim32Q8CH72 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim32Q8CH72 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim32Q8CH72 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim32Q8CH72 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim32Q8CH72 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trim32Q8CH72 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim32Q8CH72 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim32Q8CH72 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.33■□□□□ 0.21
Trim32Q8CH72 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim32Q8CH72 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim32Q8CH72 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.33■□□□□ 0.21
Trim32Q8CH72 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim32Q8CH72 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim32Q8CH72 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim32Q8CH72 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim32Q8CH72 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.33■□□□□ 0.2
Trim32Q8CH72 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim32Q8CH72 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Trim32Q8CH72 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC16.33■□□□□ 0.2
Trim32Q8CH72 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.33■□□□□ 0.2
Trim32Q8CH72 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim32Q8CH72 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim32Q8CH72 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim32Q8CH72 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms