Protein–RNA interactions for Protein: Q8CE47

Slc49a3, Solute carrier family 49 member A3, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc49a3Q8CE47 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Slc49a3Q8CE47 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc49a3Q8CE47 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Slc49a3Q8CE47 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Slc49a3Q8CE47 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc49a3Q8CE47 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Slc49a3Q8CE47 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.43□□□□□ -0.26
Slc49a3Q8CE47 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Slc49a3Q8CE47 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Slc49a3Q8CE47 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc49a3Q8CE47 Gm23634-201ENSMUST00000175071 91 ntBASIC13.43□□□□□ -0.26
Slc49a3Q8CE47 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Slc49a3Q8CE47 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc49a3Q8CE47 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc49a3Q8CE47 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.43□□□□□ -0.26
Slc49a3Q8CE47 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc49a3Q8CE47 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.43□□□□□ -0.26
Slc49a3Q8CE47 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.43□□□□□ -0.26
Slc49a3Q8CE47 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Slc49a3Q8CE47 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.43□□□□□ -0.26
Slc49a3Q8CE47 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc49a3Q8CE47 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc49a3Q8CE47 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc49a3Q8CE47 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Slc49a3Q8CE47 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Slc49a3Q8CE47 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc49a3Q8CE47 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 AA414768-201ENSMUST00000121924 1257 ntBASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Gm29518-201ENSMUST00000190858 372 ntBASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc49a3Q8CE47 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc49a3Q8CE47 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.4□□□□□ -0.26
Slc49a3Q8CE47 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc49a3Q8CE47 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Slc49a3Q8CE47 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc49a3Q8CE47 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc49a3Q8CE47 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc49a3Q8CE47 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms