Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim9Q8C7M3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim9Q8C7M3 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trim9Q8C7M3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim9Q8C7M3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim9Q8C7M3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim9Q8C7M3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim9Q8C7M3 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim9Q8C7M3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim9Q8C7M3 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim9Q8C7M3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim9Q8C7M3 Gm14042-201ENSMUST00000120139 833 ntBASIC16.11■□□□□ 0.17
Trim9Q8C7M3 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.11■□□□□ 0.17
Trim9Q8C7M3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Trim9Q8C7M3 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.11■□□□□ 0.17
Trim9Q8C7M3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
Trim9Q8C7M3 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.11■□□□□ 0.17
Trim9Q8C7M3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Trim9Q8C7M3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.11■□□□□ 0.17
Trim9Q8C7M3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim9Q8C7M3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim9Q8C7M3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim9Q8C7M3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Trim9Q8C7M3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim9Q8C7M3 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim9Q8C7M3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim9Q8C7M3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim9Q8C7M3 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim9Q8C7M3 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trim9Q8C7M3 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.09■□□□□ 0.17
Trim9Q8C7M3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim9Q8C7M3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trim9Q8C7M3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim9Q8C7M3 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim9Q8C7M3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.09■□□□□ 0.17
Trim9Q8C7M3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim9Q8C7M3 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
Trim9Q8C7M3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim9Q8C7M3 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.09■□□□□ 0.17
Trim9Q8C7M3 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
Trim9Q8C7M3 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim9Q8C7M3 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim9Q8C7M3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Trim9Q8C7M3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim9Q8C7M3 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim9Q8C7M3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim9Q8C7M3 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trim9Q8C7M3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim9Q8C7M3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Trim9Q8C7M3 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim9Q8C7M3 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim9Q8C7M3 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.08■□□□□ 0.17
Trim9Q8C7M3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim9Q8C7M3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim9Q8C7M3 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim9Q8C7M3 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.08■□□□□ 0.16
Trim9Q8C7M3 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.08■□□□□ 0.16
Trim9Q8C7M3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim9Q8C7M3 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.08■□□□□ 0.16
Trim9Q8C7M3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim9Q8C7M3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.08■□□□□ 0.16
Trim9Q8C7M3 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.08■□□□□ 0.16
Trim9Q8C7M3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim9Q8C7M3 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.08■□□□□ 0.16
Trim9Q8C7M3 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trim9Q8C7M3 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.08■□□□□ 0.16
Trim9Q8C7M3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim9Q8C7M3 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms