Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.31■□□□□ 0.36
Nek11Q8C0Q4 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Nek11Q8C0Q4 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Nek11Q8C0Q4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nek11Q8C0Q4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nek11Q8C0Q4 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nek11Q8C0Q4 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nek11Q8C0Q4 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.3■□□□□ 0.36
Nek11Q8C0Q4 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nek11Q8C0Q4 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nek11Q8C0Q4 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nek11Q8C0Q4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nek11Q8C0Q4 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nek11Q8C0Q4 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nek11Q8C0Q4 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nek11Q8C0Q4 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Nek11Q8C0Q4 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Nek11Q8C0Q4 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nek11Q8C0Q4 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nek11Q8C0Q4 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.3■□□□□ 0.36
Nek11Q8C0Q4 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Nek11Q8C0Q4 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.3■□□□□ 0.36
Nek11Q8C0Q4 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nek11Q8C0Q4 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nek11Q8C0Q4 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Nek11Q8C0Q4 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nek11Q8C0Q4 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nek11Q8C0Q4 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nek11Q8C0Q4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nek11Q8C0Q4 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nek11Q8C0Q4 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Gm10275-202ENSMUST00000168697 495 ntBASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Gm10275-201ENSMUST00000092620 635 ntBASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nek11Q8C0Q4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.28■□□□□ 0.36
Nek11Q8C0Q4 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nek11Q8C0Q4 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Nek11Q8C0Q4 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.28■□□□□ 0.36
Nek11Q8C0Q4 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.28■□□□□ 0.36
Nek11Q8C0Q4 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Nek11Q8C0Q4 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nek11Q8C0Q4 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nek11Q8C0Q4 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.28■□□□□ 0.36
Nek11Q8C0Q4 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nek11Q8C0Q4 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.28■□□□□ 0.36
Nek11Q8C0Q4 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nek11Q8C0Q4 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nek11Q8C0Q4 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.28■□□□□ 0.36
Nek11Q8C0Q4 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.28■□□□□ 0.36
Nek11Q8C0Q4 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nek11Q8C0Q4 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.28■□□□□ 0.36
Nek11Q8C0Q4 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Nek11Q8C0Q4 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nek11Q8C0Q4 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nek11Q8C0Q4 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.28■□□□□ 0.36
Nek11Q8C0Q4 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nek11Q8C0Q4 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nek11Q8C0Q4 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nek11Q8C0Q4 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nek11Q8C0Q4 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nek11Q8C0Q4 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nek11Q8C0Q4 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nek11Q8C0Q4 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.27■□□□□ 0.36
Nek11Q8C0Q4 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nek11Q8C0Q4 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Nek11Q8C0Q4 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nek11Q8C0Q4 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nek11Q8C0Q4 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nek11Q8C0Q4 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nek11Q8C0Q4 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nek11Q8C0Q4 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nek11Q8C0Q4 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nek11Q8C0Q4 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nek11Q8C0Q4 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.27■□□□□ 0.36
Nek11Q8C0Q4 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Nek11Q8C0Q4 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms