Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Scfd1Q8BRF7 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.64■□□□□ 0.26
Scfd1Q8BRF7 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 Gm7488-201ENSMUST00000117148 684 ntBASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 Gm29667-201ENSMUST00000190817 490 ntBASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 Gm44855-201ENSMUST00000205725 362 ntBASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 Syt7-205ENSMUST00000224135 1557 ntBASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Scfd1Q8BRF7 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scfd1Q8BRF7 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.63■□□□□ 0.25
Scfd1Q8BRF7 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.63■□□□□ 0.25
Scfd1Q8BRF7 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scfd1Q8BRF7 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scfd1Q8BRF7 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scfd1Q8BRF7 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Scfd1Q8BRF7 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scfd1Q8BRF7 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Scfd1Q8BRF7 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scfd1Q8BRF7 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scfd1Q8BRF7 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.63■□□□□ 0.25
Scfd1Q8BRF7 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scfd1Q8BRF7 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scfd1Q8BRF7 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Scfd1Q8BRF7 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.63■□□□□ 0.25
Scfd1Q8BRF7 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Scfd1Q8BRF7 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Scfd1Q8BRF7 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Scfd1Q8BRF7 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scfd1Q8BRF7 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Scfd1Q8BRF7 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.63■□□□□ 0.25
Scfd1Q8BRF7 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.63■□□□□ 0.25
Scfd1Q8BRF7 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scfd1Q8BRF7 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scfd1Q8BRF7 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scfd1Q8BRF7 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scfd1Q8BRF7 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
Scfd1Q8BRF7 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Scfd1Q8BRF7 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Scfd1Q8BRF7 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scfd1Q8BRF7 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scfd1Q8BRF7 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Scfd1Q8BRF7 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.62■□□□□ 0.25
Scfd1Q8BRF7 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scfd1Q8BRF7 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scfd1Q8BRF7 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Scfd1Q8BRF7 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Scfd1Q8BRF7 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scfd1Q8BRF7 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scfd1Q8BRF7 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Scfd1Q8BRF7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scfd1Q8BRF7 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scfd1Q8BRF7 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scfd1Q8BRF7 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scfd1Q8BRF7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scfd1Q8BRF7 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms