Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf38Q8BI21 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Gm7222-201ENSMUST00000117512 906 ntBASIC14.1□□□□□ -0.15
Rnf38Q8BI21 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Gm6550-201ENSMUST00000187574 993 ntBASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Gm7461-201ENSMUST00000058918 827 ntBASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf38Q8BI21 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Gm11764-201ENSMUST00000120221 623 ntBASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Mzt1-203ENSMUST00000227948 952 ntBASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms