Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Scn3bQ8BHK2 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Scn3bQ8BHK2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Scn3bQ8BHK2 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Scn3bQ8BHK2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Scn3bQ8BHK2 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Scn3bQ8BHK2 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.58□□□□□ -0.23
Scn3bQ8BHK2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn3bQ8BHK2 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Scn3bQ8BHK2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scn3bQ8BHK2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn3bQ8BHK2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Scn3bQ8BHK2 Gm15165-201ENSMUST00000118140 502 ntBASIC13.58□□□□□ -0.24
Scn3bQ8BHK2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.58□□□□□ -0.24
Scn3bQ8BHK2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scn3bQ8BHK2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Scn3bQ8BHK2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.58□□□□□ -0.24
Scn3bQ8BHK2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scn3bQ8BHK2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Scn3bQ8BHK2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn3bQ8BHK2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn3bQ8BHK2 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Scn3bQ8BHK2 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Scn3bQ8BHK2 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Scn3bQ8BHK2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn3bQ8BHK2 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Scn3bQ8BHK2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn3bQ8BHK2 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Scn3bQ8BHK2 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn3bQ8BHK2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn3bQ8BHK2 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn3bQ8BHK2 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
Scn3bQ8BHK2 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.58□□□□□ -0.24
Scn3bQ8BHK2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Scn3bQ8BHK2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn3bQ8BHK2 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Scn3bQ8BHK2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Scn3bQ8BHK2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn3bQ8BHK2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn3bQ8BHK2 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Scn3bQ8BHK2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn3bQ8BHK2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn3bQ8BHK2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn3bQ8BHK2 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn3bQ8BHK2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn3bQ8BHK2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.56□□□□□ -0.24
Scn3bQ8BHK2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Scn3bQ8BHK2 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.56□□□□□ -0.24
Scn3bQ8BHK2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.56□□□□□ -0.24
Scn3bQ8BHK2 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.56□□□□□ -0.24
Scn3bQ8BHK2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scn3bQ8BHK2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn3bQ8BHK2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Scn3bQ8BHK2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn3bQ8BHK2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn3bQ8BHK2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn3bQ8BHK2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn3bQ8BHK2 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Scn3bQ8BHK2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn3bQ8BHK2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms