Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubp1Q811S7 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Gm6973-201ENSMUST00000117080 721 ntBASIC14.41□□□□□ -0.1
Ubp1Q811S7 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Gm13365-201ENSMUST00000121188 973 ntBASIC14.41□□□□□ -0.1
Ubp1Q811S7 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.41□□□□□ -0.1
Ubp1Q811S7 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.41□□□□□ -0.1
Ubp1Q811S7 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubp1Q811S7 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Gm37648-201ENSMUST00000192072 2563 ntBASIC14.41□□□□□ -0.1
Ubp1Q811S7 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubp1Q811S7 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubp1Q811S7 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubp1Q811S7 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ubp1Q811S7 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubp1Q811S7 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubp1Q811S7 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ubp1Q811S7 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubp1Q811S7 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ubp1Q811S7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ubp1Q811S7 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.4□□□□□ -0.1
Ubp1Q811S7 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
Ubp1Q811S7 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubp1Q811S7 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ubp1Q811S7 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ubp1Q811S7 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ubp1Q811S7 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Ubp1Q811S7 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ubp1Q811S7 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubp1Q811S7 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubp1Q811S7 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ubp1Q811S7 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubp1Q811S7 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Ubp1Q811S7 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ubp1Q811S7 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ubp1Q811S7 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubp1Q811S7 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ubp1Q811S7 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubp1Q811S7 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ubp1Q811S7 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubp1Q811S7 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubp1Q811S7 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ubp1Q811S7 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Ubp1Q811S7 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubp1Q811S7 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ubp1Q811S7 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ubp1Q811S7 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubp1Q811S7 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubp1Q811S7 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.39□□□□□ -0.11
Ubp1Q811S7 Gm13464-201ENSMUST00000119418 935 ntBASIC14.39□□□□□ -0.11
Ubp1Q811S7 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.39□□□□□ -0.11
Ubp1Q811S7 Mir1895-201ENSMUST00000122615 79 ntBASIC14.39□□□□□ -0.11
Ubp1Q811S7 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.39□□□□□ -0.11
Ubp1Q811S7 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ubp1Q811S7 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.39□□□□□ -0.11
Ubp1Q811S7 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.39□□□□□ -0.11
Ubp1Q811S7 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.39□□□□□ -0.11
Ubp1Q811S7 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubp1Q811S7 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubp1Q811S7 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubp1Q811S7 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Ubp1Q811S7 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubp1Q811S7 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms