Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ush1gQ80T11 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ush1gQ80T11 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.98■□□□□ 0.15
Ush1gQ80T11 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Ush1gQ80T11 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ush1gQ80T11 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
Ush1gQ80T11 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Ush1gQ80T11 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ush1gQ80T11 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Ush1gQ80T11 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.98■□□□□ 0.15
Ush1gQ80T11 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ush1gQ80T11 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ush1gQ80T11 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ush1gQ80T11 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ush1gQ80T11 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ush1gQ80T11 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ush1gQ80T11 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ush1gQ80T11 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ush1gQ80T11 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ush1gQ80T11 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ush1gQ80T11 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ush1gQ80T11 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ush1gQ80T11 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ush1gQ80T11 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ush1gQ80T11 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ush1gQ80T11 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ush1gQ80T11 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.97■□□□□ 0.15
Ush1gQ80T11 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.97■□□□□ 0.15
Ush1gQ80T11 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.97■□□□□ 0.15
Ush1gQ80T11 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ush1gQ80T11 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ush1gQ80T11 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ush1gQ80T11 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ush1gQ80T11 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ush1gQ80T11 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ush1gQ80T11 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ush1gQ80T11 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ush1gQ80T11 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ush1gQ80T11 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ush1gQ80T11 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ush1gQ80T11 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.97■□□□□ 0.15
Ush1gQ80T11 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ush1gQ80T11 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Ush1gQ80T11 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ush1gQ80T11 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ush1gQ80T11 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ush1gQ80T11 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ush1gQ80T11 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Ush1gQ80T11 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ush1gQ80T11 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.96■□□□□ 0.15
Ush1gQ80T11 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ush1gQ80T11 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ush1gQ80T11 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ush1gQ80T11 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ush1gQ80T11 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ush1gQ80T11 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ush1gQ80T11 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.96■□□□□ 0.15
Ush1gQ80T11 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ush1gQ80T11 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ush1gQ80T11 Gm28631-201ENSMUST00000190740 334 ntBASIC15.96■□□□□ 0.15
Ush1gQ80T11 Gm44855-201ENSMUST00000205725 362 ntBASIC15.96■□□□□ 0.15
Ush1gQ80T11 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ush1gQ80T11 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.96■□□□□ 0.15
Ush1gQ80T11 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ush1gQ80T11 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.96■□□□□ 0.15
Ush1gQ80T11 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ush1gQ80T11 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Ush1gQ80T11 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ush1gQ80T11 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ush1gQ80T11 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Ush1gQ80T11 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ush1gQ80T11 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.14
Ush1gQ80T11 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Ush1gQ80T11 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ush1gQ80T11 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.95■□□□□ 0.14
Ush1gQ80T11 Syt7-204ENSMUST00000223586 1344 ntBASIC15.95■□□□□ 0.14
Ush1gQ80T11 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ush1gQ80T11 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ush1gQ80T11 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ush1gQ80T11 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ush1gQ80T11 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ush1gQ80T11 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ush1gQ80T11 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ush1gQ80T11 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ush1gQ80T11 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ush1gQ80T11 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.95■□□□□ 0.14
Ush1gQ80T11 Gm15487-201ENSMUST00000122373 465 ntBASIC15.95■□□□□ 0.14
Ush1gQ80T11 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Ush1gQ80T11 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Ush1gQ80T11 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Ush1gQ80T11 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ush1gQ80T11 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ush1gQ80T11 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.95■□□□□ 0.14
Ush1gQ80T11 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Ush1gQ80T11 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ush1gQ80T11 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Ush1gQ80T11 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ush1gQ80T11 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ush1gQ80T11 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Ush1gQ80T11 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms