Protein–RNA interactions for Protein: Q80SW5

Etd, ETD, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EtdQ80SW5 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
EtdQ80SW5 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
EtdQ80SW5 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
EtdQ80SW5 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
EtdQ80SW5 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
EtdQ80SW5 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
EtdQ80SW5 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
EtdQ80SW5 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC11.35□□□□□ -0.59
EtdQ80SW5 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
EtdQ80SW5 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
EtdQ80SW5 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
EtdQ80SW5 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
EtdQ80SW5 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
EtdQ80SW5 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
EtdQ80SW5 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
EtdQ80SW5 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
EtdQ80SW5 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
EtdQ80SW5 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
EtdQ80SW5 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC11.34□□□□□ -0.59
EtdQ80SW5 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.34□□□□□ -0.59
EtdQ80SW5 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.34□□□□□ -0.59
EtdQ80SW5 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
EtdQ80SW5 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
EtdQ80SW5 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
EtdQ80SW5 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
EtdQ80SW5 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
EtdQ80SW5 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
EtdQ80SW5 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
EtdQ80SW5 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC11.34□□□□□ -0.59
EtdQ80SW5 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.34□□□□□ -0.59
EtdQ80SW5 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC11.34□□□□□ -0.59
EtdQ80SW5 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
EtdQ80SW5 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
EtdQ80SW5 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
EtdQ80SW5 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
EtdQ80SW5 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
EtdQ80SW5 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
EtdQ80SW5 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
EtdQ80SW5 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.34□□□□□ -0.59
EtdQ80SW5 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
EtdQ80SW5 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.34□□□□□ -0.59
EtdQ80SW5 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.34□□□□□ -0.59
EtdQ80SW5 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
EtdQ80SW5 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.59
EtdQ80SW5 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
EtdQ80SW5 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.59
EtdQ80SW5 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
EtdQ80SW5 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
EtdQ80SW5 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
EtdQ80SW5 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
EtdQ80SW5 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
EtdQ80SW5 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
EtdQ80SW5 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
EtdQ80SW5 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.33□□□□□ -0.6
EtdQ80SW5 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
EtdQ80SW5 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
EtdQ80SW5 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
EtdQ80SW5 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
EtdQ80SW5 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.33□□□□□ -0.6
EtdQ80SW5 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC11.33□□□□□ -0.6
EtdQ80SW5 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC11.33□□□□□ -0.6
EtdQ80SW5 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC11.33□□□□□ -0.6
EtdQ80SW5 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
EtdQ80SW5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
EtdQ80SW5 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
EtdQ80SW5 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
EtdQ80SW5 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
EtdQ80SW5 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
EtdQ80SW5 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
EtdQ80SW5 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
EtdQ80SW5 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
EtdQ80SW5 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
EtdQ80SW5 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
EtdQ80SW5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
EtdQ80SW5 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
EtdQ80SW5 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
EtdQ80SW5 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
EtdQ80SW5 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
EtdQ80SW5 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.33□□□□□ -0.6
EtdQ80SW5 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
EtdQ80SW5 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
EtdQ80SW5 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
EtdQ80SW5 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
EtdQ80SW5 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
EtdQ80SW5 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
EtdQ80SW5 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.33□□□□□ -0.6
EtdQ80SW5 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
EtdQ80SW5 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
EtdQ80SW5 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
EtdQ80SW5 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
EtdQ80SW5 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
EtdQ80SW5 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
EtdQ80SW5 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
EtdQ80SW5 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
EtdQ80SW5 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
EtdQ80SW5 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
EtdQ80SW5 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
EtdQ80SW5 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
EtdQ80SW5 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
EtdQ80SW5 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms