Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx58Q6Q899 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx58Q6Q899 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.04■□□□□ 0.48
Ddx58Q6Q899 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx58Q6Q899 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx58Q6Q899 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx58Q6Q899 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx58Q6Q899 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx58Q6Q899 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx58Q6Q899 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx58Q6Q899 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ddx58Q6Q899 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx58Q6Q899 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx58Q6Q899 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx58Q6Q899 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ddx58Q6Q899 Gm43703-201ENSMUST00000200523 763 ntBASIC18.03■□□□□ 0.48
Ddx58Q6Q899 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC18.03■□□□□ 0.48
Ddx58Q6Q899 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx58Q6Q899 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx58Q6Q899 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx58Q6Q899 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx58Q6Q899 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx58Q6Q899 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ddx58Q6Q899 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx58Q6Q899 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ddx58Q6Q899 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx58Q6Q899 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx58Q6Q899 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx58Q6Q899 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Ddx58Q6Q899 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx58Q6Q899 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx58Q6Q899 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx58Q6Q899 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx58Q6Q899 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx58Q6Q899 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx58Q6Q899 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx58Q6Q899 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx58Q6Q899 Gm4204-201ENSMUST00000110798 1231 ntBASIC18.02■□□□□ 0.48
Ddx58Q6Q899 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx58Q6Q899 Cd63-ps-201ENSMUST00000145417 875 ntBASIC18.02■□□□□ 0.48
Ddx58Q6Q899 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx58Q6Q899 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx58Q6Q899 Gm5866-201ENSMUST00000177881 973 ntBASIC18.02■□□□□ 0.48
Ddx58Q6Q899 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC18.02■□□□□ 0.48
Ddx58Q6Q899 Gm45751-201ENSMUST00000210185 1573 ntBASIC18.02■□□□□ 0.48
Ddx58Q6Q899 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx58Q6Q899 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx58Q6Q899 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx58Q6Q899 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx58Q6Q899 Mir125a-201ENSMUST00000083545 68 ntBASIC18.02■□□□□ 0.48
Ddx58Q6Q899 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx58Q6Q899 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx58Q6Q899 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx58Q6Q899 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ddx58Q6Q899 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ddx58Q6Q899 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC18.02■□□□□ 0.47
Ddx58Q6Q899 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ddx58Q6Q899 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx58Q6Q899 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ddx58Q6Q899 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Ddx58Q6Q899 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx58Q6Q899 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx58Q6Q899 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx58Q6Q899 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ddx58Q6Q899 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx58Q6Q899 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx58Q6Q899 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx58Q6Q899 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC18.01■□□□□ 0.47
Ddx58Q6Q899 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx58Q6Q899 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx58Q6Q899 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx58Q6Q899 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC18.01■□□□□ 0.47
Ddx58Q6Q899 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx58Q6Q899 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Ddx58Q6Q899 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx58Q6Q899 BC001981-202ENSMUST00000191393 1545 ntBASIC18.01■□□□□ 0.47
Ddx58Q6Q899 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx58Q6Q899 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx58Q6Q899 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ddx58Q6Q899 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx58Q6Q899 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx58Q6Q899 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx58Q6Q899 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ddx58Q6Q899 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx58Q6Q899 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx58Q6Q899 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx58Q6Q899 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx58Q6Q899 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Ddx58Q6Q899 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ddx58Q6Q899 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC18■□□□□ 0.47
Ddx58Q6Q899 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ddx58Q6Q899 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ddx58Q6Q899 Gm3436-201ENSMUST00000179930 840 ntBASIC18■□□□□ 0.47
Ddx58Q6Q899 AC156016.3-201ENSMUST00000228623 344 ntBASIC18■□□□□ 0.47
Ddx58Q6Q899 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC18■□□□□ 0.47
Ddx58Q6Q899 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ddx58Q6Q899 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx58Q6Q899 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ddx58Q6Q899 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx58Q6Q899 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms