Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc2Q6PDG5 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Smarcc2Q6PDG5 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc2Q6PDG5 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.05■□□□□ 0.32
Smarcc2Q6PDG5 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc2Q6PDG5 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.05■□□□□ 0.32
Smarcc2Q6PDG5 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc2Q6PDG5 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc2Q6PDG5 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc2Q6PDG5 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc2Q6PDG5 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc2Q6PDG5 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc2Q6PDG5 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc2Q6PDG5 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc2Q6PDG5 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc2Q6PDG5 Rpph1-201ENSMUST00000175096 319 ntBASIC17.04■□□□□ 0.32
Smarcc2Q6PDG5 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc2Q6PDG5 Gm45612-201ENSMUST00000211320 160 ntBASIC17.04■□□□□ 0.32
Smarcc2Q6PDG5 Chchd1-203ENSMUST00000224633 557 ntBASIC17.04■□□□□ 0.32
Smarcc2Q6PDG5 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc2Q6PDG5 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc2Q6PDG5 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Smarcc2Q6PDG5 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc2Q6PDG5 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc2Q6PDG5 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Smarcc2Q6PDG5 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Smarcc2Q6PDG5 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Smarcc2Q6PDG5 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc2Q6PDG5 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Smarcc2Q6PDG5 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc2Q6PDG5 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc2Q6PDG5 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc2Q6PDG5 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcc2Q6PDG5 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Smarcc2Q6PDG5 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcc2Q6PDG5 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcc2Q6PDG5 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.02■□□□□ 0.32
Smarcc2Q6PDG5 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Smarcc2Q6PDG5 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcc2Q6PDG5 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Smarcc2Q6PDG5 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Smarcc2Q6PDG5 Gm20553-201ENSMUST00000204205 844 ntBASIC17.02■□□□□ 0.32
Smarcc2Q6PDG5 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.02■□□□□ 0.32
Smarcc2Q6PDG5 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.02■□□□□ 0.32
Smarcc2Q6PDG5 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcc2Q6PDG5 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcc2Q6PDG5 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcc2Q6PDG5 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Smarcc2Q6PDG5 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcc2Q6PDG5 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Smarcc2Q6PDG5 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Smarcc2Q6PDG5 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Smarcc2Q6PDG5 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smarcc2Q6PDG5 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smarcc2Q6PDG5 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Smarcc2Q6PDG5 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Smarcc2Q6PDG5 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smarcc2Q6PDG5 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.02■□□□□ 0.31
Smarcc2Q6PDG5 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smarcc2Q6PDG5 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smarcc2Q6PDG5 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Smarcc2Q6PDG5 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.02■□□□□ 0.31
Smarcc2Q6PDG5 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.02■□□□□ 0.31
Smarcc2Q6PDG5 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smarcc2Q6PDG5 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcc2Q6PDG5 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcc2Q6PDG5 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.01■□□□□ 0.31
Smarcc2Q6PDG5 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcc2Q6PDG5 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcc2Q6PDG5 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcc2Q6PDG5 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcc2Q6PDG5 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms